Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0008 ATGGAGGACCTACCTCTACCCGCTCTCTTCGACCAAGCGAAGAAGATCTATACGCTTGCATCAGATTCATCAGCCGATCAGGAGCTTATTAGAAAGGGTTGTGATGCCTTAGGAAAGTGCGAGGACATGACAAGCAAGCTGGGATTGTTCTCATTGAATGAGACCAAGGATGATATCGGCACCTCAAATCTCAAATATATTCTGGTGCCTTTTTATCTCGCTGAACTGACTGAAAAGATTGCACAAGATGACAGGATTCAGCTTCTTAAGGCTTCCCAGCAAAGATTAAAAGAATTCATTTCGTTTTGTGAGGCAATGGAACTTGTACCCGAAGAGGACCTAGAATCCTCCGCACAAGCTATTTCAGACCGAAGGGCTCGCAAGATTGCTCGGTTTAAACGACAGAAAGCTGCAGAATCAAAATTACTGGAGATTAAGGAGCGGAAAGAGCGACGTGGACGTTCTAGTAAAGCAGCTGCTTTATCCACCCCCATTGAGGCTGGCGAGGAAGATCTGCTGGACGATGATGGGGAGGAAGAGCGAGAGGCTTGGCTTACTGCTATCTCCTTGGCAATCTGCAAGGCATTTGATCTATTGGAAATGCTGAAGAAGGAGGAAGAGATGCTATCTGCTATTAAGGAGAAGCAAGCCAAGGAAGGGGGCCAGGATTTCTCTAAGGACCTTCTTGATGATCGAATGAGGACAGCAGAAGCTTGGCATCGTGATGCCACTGTTAGAGCACAGTACATGAAACCAAGCCAGCCAATCACTTGTGCTACTTTTGCTCAAGATGTTCTGGAAGGGAGAGCAAGTGTTTCTCAGGCACATAAACACAAACATCAGCCCATGATATTTGGACCTGCAAGTCTAGTCGGTGGATCCCTTACAAGTGAGAGAGATAGGATGGCAGCACAGGTTTTCCAGCCTGGCTTCCGGCTACCAACGATGAGCATTGAGGAGGCTGGGCTAAGGGAGATGGAGTTGATGAGCCAATGGCAAGAGAGGACTGCGAAGTTCATGGAAGAAACCAATACCTCCTGGTACAAGGAGAGTCAAAAACCAGGGCCTAGTGGTGGAGAGAATGAGGAAGATGAAGATGACGATGCTGCACAGGACAAGGCCAGGGCCTGGGATGACTGGAAAGATGACAATCCTCGTGGTGCAGGCAACAAGAAGCTTACTCCATGTGGCTAA 1194 47.91 MEDLPLPALFDQAKKIYTLASDSSADQELIRKGCDALGKCEDMTSKLGLFSLNETKDDIGTSNLKYILVPFYLAELTEKIAQDDRIQLLKASQQRLKEFISFCEAMELVPEEDLESSAQAISDRRARKIARFKRQKAAESKLLEIKERKERRGRSSKAAALSTPIEAGEEDLLDDDGEEEREAWLTAISLAICKAFDLLEMLKKEEEMLSAIKEKQAKEGGQDFSKDLLDDRMRTAEAWHRDATVRAQYMKPSQPITCATFAQDVLEGRASVSQAHKHKHQPMIFGPASLVGGSLTSERDRMAAQVFQPGFRLPTMSIEEAGLREMELMSQWQERTAKFMEETNTSWYKESQKPGPSGGENEEDEDDDAAQDKARAWDDWKDDNPRGAGNKKLTPCG 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 55968 59111 + Conep14aG0000900.1 Cone14ag0008 451857

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0008 397 Gene3D - 5 222 IPR038511 -
Cone14ag0008 397 MobiDBLite consensus disorder prediction 342 397 - -
Cone14ag0008 397 MobiDBLite consensus disorder prediction 370 388 - -
Cone14ag0008 397 PANTHER IMMUNOGLOBULIN-BINDING PROTEIN 1 2 394 IPR007304 GO:0005829(PANTHER)|GO:0009966(InterPro)|GO:0035303(PANTHER)|GO:0051721(PANTHER)
Cone14ag0008 397 FunFam PP2A regulatory subunit TAP46 5 223 - -
Cone14ag0008 397 Pfam TAP42-like family 6 385 IPR007304 GO:0009966(InterPro)
Cone14ag0008 397 MobiDBLite consensus disorder prediction 153 174 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0008 K17606 - - csv:101208902 573.548
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0008 Cone-Chr14:55968 Cone15ag0009 Cone-Chr15:85260 1.26E-253 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g1035 . Blo15g00086 . . . Bpe07g01017 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag0008 Cone15ag0009 . . . . . . Bda06g00786 . . . . Bma12g01205 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008471 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 35