Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0014 ATGGGCTATGGAAGGCTCAATTCTCTGGACATGGCCGGAGGCAGAGGCCTCGAACAGTCAGACAGCGCCGCCTCACTTCCACGGCCATCAAACTGCAGGAGGAAGAAACTCATCATCCTTTCTATATTCGCTCTCCTTCTAATTGTCGCCTCCGCCGTATCCACCGCCGTCTACATCGGCCACCGCCCCTCTGACTCTGGTGGAATGGTTCATGGGCTGCCTCGAAAACCGACCCGGGCTATCTCTCGAACCTGTAGCCTGACCCGCTACCCCTCACTCTGCGTCAACTCGCTCTTAGACTTCCCCGGCTCAGTGAGCGCCGGCGAGCAAGACCTCGTCCACATTACCGTCAACATGACTCTGCACCACTTCACTAGAGCTCTCTACATGTCCTCCGAGATCTCCACCGTCGATATGCATCCACGTGTACGGTCGGCATACGAGGACTGCCTCGAGCTCCTGGAGGACTCCGTGGAGGCTCTCTCACGGTCCTTGATCTCCATAGCTTCTACCTCGGGTGGGACCAGCACGAGTCAGGACGTGCTGACGTGGCTGAGCGCGGCGCTGACGAATCAGGACACGTGCGGGGAGGGATTCGAGGATGTGAGTGGGTCGGTGAAGGATCGGATGGTGGAGCAGCTGCAGGACTTGTCGGAGCTAGTGAGCAACTGCTTGGCCATATTTTCAGGGAGCGATGATTCGGGCGATTTCTCGGGCGTGCCGATACAGAACAGGCGCAGGCGATTGCTGGAAGAGAATGGGGAGGCAGATATTCCGGCGAATTTCCCGAAATGGTTGAGCAGGAAGGAGAGGAAGTTGCTGAGCTTACCCGTTTCGGCGATACAGGCCGATATTATCGTGTCCAAGGACGGGAATGGGTCCTGCAAGAAGATTTCGGAGGCTATTAAGATGGCCCCACAGTTCAGTAATCGAAGAACCATTATTTACGTGATGGCAGGAAGGTACGAAGAGGATAATCTGAAAGTGGGAAAGAAAAAGACCAACTTGATGTTCATAGGAGATGGTAAGGGTAAGACTGTCATTTCGGGAGGCAAAAGCGTCTTCGACAACATGACCACATTCCACACCGCCACCTTTGCTGCTACTGGGGCTGGGGTTATCTTAAGAGACATTACCTTTGAGAATTGGGCCGGACCAAGCAAGCACCAAGCTGTGGCTCTTCGGGTCGGAGCTGACCATGCAGTGGTGTATCGTTGCAACATAATCGGTTACCAAGACACTCTTTACGTCCACTCCAACCGCCAATTTTTCCGAGAATGCGACATCTACGGAACCGTAGATTTCATTTTTGGAAATGCAGCCGTAGTTTTCCAAAACTGCAGTCTTTATGCTCGGAAACCGATGCCCCAACAGAAAAACACCATTACAGCCCAAAACCGTAAAGACCCGTATCAAAACACAGGCATCTCGATCCATGCTTGTCGGATCCTAACCACCTCGGATCTCAATGTGTCAAAGGGCAACTTCTCTACATATTTGGGGCGTCCATGGAAATTGTACTCTAGAACCGTGTACATGATGTCGTATATCGATGATCATATACACCCCAGAGGATGGTTAGAGTGGAATACAACATTTGCATTAGACACGTTATACTATGGTGAGTACTTAAATTATGGGCCGGGTGGAGCTGTTGGACAAAGGGTCAAATGGCCTGGGTATCGGGTCATAACATCGCCAATAGAGGCAGGAAAGTTCACGGTTGCTCAATTCATATACGGCTCATCATGGTTGCCGTCCACCGGAGTTGCCTTCTTGGCCGGCTTGTCAGTCTAA 1797 52.14 MGYGRLNSLDMAGGRGLEQSDSAASLPRPSNCRRKKLIILSIFALLLIVASAVSTAVYIGHRPSDSGGMVHGLPRKPTRAISRTCSLTRYPSLCVNSLLDFPGSVSAGEQDLVHITVNMTLHHFTRALYMSSEISTVDMHPRVRSAYEDCLELLEDSVEALSRSLISIASTSGGTSTSQDVLTWLSAALTNQDTCGEGFEDVSGSVKDRMVEQLQDLSELVSNCLAIFSGSDDSGDFSGVPIQNRRRRLLEENGEADIPANFPKWLSRKERKLLSLPVSAIQADIIVSKDGNGSCKKISEAIKMAPQFSNRRTIIYVMAGRYEEDNLKVGKKKTNLMFIGDGKGKTVISGGKSVFDNMTTFHTATFAATGAGVILRDITFENWAGPSKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVFQNCSLYARKPMPQQKNTITAQNRKDPYQNTGISIHACRILTTSDLNVSKGNFSTYLGRPWKLYSRTVYMMSYIDDHIHPRGWLEWNTTFALDTLYYGEYLNYGPGGAVGQRVKWPGYRVITSPIEAGKFTVAQFIYGSSWLPSTGVAFLAGLSV 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 112197 114919 - Conep14aG0001500.1 Cone14ag0014 451863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0014 598 CDD PMEI-like_3 85 229 - -
Cone14ag0014 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 230 IPR035513 -
Cone14ag0014 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 229 IPR035513 -
Cone14ag0014 598 Gene3D - 278 596 IPR012334 -
Cone14ag0014 598 FunFam Pectinesterase 278 596 - -
Cone14ag0014 598 SUPERFAMILY Pectin lyase-like 279 595 IPR011050 -
Cone14ag0014 598 Pfam Plant invertase/pectin methylesterase inhibitor 80 227 IPR006501 GO:0004857(InterPro)
Cone14ag0014 598 NCBIfam pectinesterase inhibitor domain 60 228 IPR006501 GO:0004857(InterPro)
Cone14ag0014 598 ProSitePatterns Pectinesterase signature 2. 429 438 IPR033131 -
Cone14ag0014 598 PANTHER PECTINESTERASE 37 587 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone14ag0014 598 FunFam Pectinesterase 77 231 - -
Cone14ag0014 598 SMART PMEI_2 76 227 IPR006501 GO:0004857(InterPro)
Cone14ag0014 598 Pfam Pectinesterase 284 581 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0014 Cone-Chr14:112197 Cone20ag0960 Cone-Chr20:6865051 2.87E-156 dispersed
Cone1ag0980 Cone-Chr1:54911997 Cone14ag0014 Cone-Chr14:112197 9.31E-295 wgd
Cone14ag0014 Cone-Chr14:112197 Cone15ag0016 Cone-Chr15:125619 0 wgd
Cone14ag0014 Cone-Chr14:112197 Cone5ag0685 Cone-Chr5:2933931 2.25E-288 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0014 - - - 0.0