Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0024 ATGAGTCGCTCAGAAGATCATATCACAGGAACTCAAAATATGTCTTCCAGAAAAAACACCGAGCGAAACCCTTCTTTGAGTAGTGAAATGCATTCCCGAACGTTCAATACATCAGAAAGCTCAGTCTCAGTTAAATCTAGAAGGTTTGTTGAGTCAACTTACGACAGAGTCACAAGCCTCAAAGAACTGAAATCTTACGATGGAGATTGGCTTAATGGCTTAGTCTCCTTGGCAAAATTTCTCGAAGGACATGGGCTGTATCCTATACTGTGGAACGAGATACTTGTTGTTTTATGTCTTATTGCAGTCTCACTTGATCCCTTATTTTGTTACATTTTTGTCATTGATGAGGGCAAGAAGTGCCTTGAATTGGATCACAAGTTGAAATACATAGCCGTGGTATTGCGTTCGGTTACTGATCTTGTCTACTTTATTTTCATCATTTTTCATTTCCAAGTCGGTTACATCCCACCTTCTTCAAGAACACTTAGAAGAGGTGTCTGGTCAAAAGCATGGAGCTACCTGTTATCTTACTTTCCTATTGACATTCTTGCAGTTCTGCCTCTGCCACAGGTGTTGGTTTTAGCTGTCATTCCGAAATTAAGAGGCTCGAGCTTTGTGATTGTAATCAATTTGTTGAAATTTCTTCTGTTTATCCAATATGTCCCAAGGCTTCTTCGGATCTATTCGTTTTTAAAGAAAGTTAGATGGAGTTTTGGCATACTCCCGGAAACTGGATGGGCTAAAGCTACATTTAATCTCTTCCTTTACATGCTTGCGAGCCACGTGGTGGGAGCCTTTTGGTACTTGTTTTCGATTGAACGGACAATAACATGCTGGGATAGAGCTTGTGGTGCTGATCATCATTGTGCTTTTAATTGTAATGAAAGCTTGAGGAATAACTCATTCCTAAACGATTTGTGCTCAGCAAAGGAATCTAATAGGAAGACGGATTTTGACTTCGGAATATTCAGTGATGCCCTCAAGTCTGGTCTCCTAGATTCAACAGACTTTATAGAGAAGTTTTCTTACTGTTATTTGTGGGGCCTGCAGAGTTTAAGTTCTCTTGGTCAAAGCCTCAAAACAAGTACTTATGTATGGGAAATCTACTTCGCGGCTCTCATTTCCATATCTGGGCTGGTTTTATTTGCACTTCTCATTGGAAATTTGCAGACATATTTGCAGTCCAAAATAGCAAGGTTAGAGGAAATGAGACTGAAAGCGCAAGACATAGAATTGTGGATGGCTTTCCATTCACTTCCCCGGAATCTAAAGAAGCGGATCAAAAAGTATCAACGGTACAAATGGCAGGAAACTAGAGGTGCCGATATTGAGAATCTTCTCCATAATCTTCCTCGAGATATCCAAAGAGAAATAAAACGCCACCTCTGCATGATCTCTCTCACAAAAGTATCTTTGCTTCAAAACATGGATGAGAGGCTCTTGGATGCAATCTGTGATTATCTCAAGCCGGTGCTGTACATTGAGCAAAGCTTCATTGCAAGAGAGGGAGAGCCTCTTGACGAGATGATCTTCATTTGTCGAGGCAAACTGTGGATATACACGAGCAATAATAACTCCGGAATTAGTGAGAGTCTTGACAAAGGTGATTTCTATGGGGAAGAACTTCTCTCTTGGGCACTAAAACATCCATTTTCCTCGAATGTTCCGATTTCAACTAAAACGGTTCAAGCACACACTAAAGTGGAGGCATTTTCTCTAATGGCCAATGACTTGAGGACTGTTATAGAGAAATTTTGGTGGCTTTTCAATAAAAAGCTAGATCATTCTCCACTCTTTGCAGCTTTTGCTATACAAGCAGCTTGGCGTAGGCACTGTAAAAATAAGCTTGAAAGGCAATCGCGTTTAGTTATGGGGGAACAGAAATCAAGTTTAGGAATCACCGTTTATGCCTCGAGATTCGTGGCGGGAACACTTGGTGCTTTGAGGGTAAGAAAGGCGCTTAAGGCTAACATAGTATGTACTAAGGTCTGA 1995 40.75 MSRSEDHITGTQNMSSRKNTERNPSLSSEMHSRTFNTSESSVSVKSRRFVESTYDRVTSLKELKSYDGDWLNGLVSLAKFLEGHGLYPILWNEILVVLCLIAVSLDPLFCYIFVIDEGKKCLELDHKLKYIAVVLRSVTDLVYFIFIIFHFQVGYIPPSSRTLRRGVWSKAWSYLLSYFPIDILAVLPLPQVLVLAVIPKLRGSSFVIVINLLKFLLFIQYVPRLLRIYSFLKKVRWSFGILPETGWAKATFNLFLYMLASHVVGAFWYLFSIERTITCWDRACGADHHCAFNCNESLRNNSFLNDLCSAKESNRKTDFDFGIFSDALKSGLLDSTDFIEKFSYCYLWGLQSLSSLGQSLKTSTYVWEIYFAALISISGLVLFALLIGNLQTYLQSKIARLEEMRLKAQDIELWMAFHSLPRNLKKRIKKYQRYKWQETRGADIENLLHNLPRDIQREIKRHLCMISLTKVSLLQNMDERLLDAICDYLKPVLYIEQSFIAREGEPLDEMIFICRGKLWIYTSNNNSGISESLDKGDFYGEELLSWALKHPFSSNVPISTKTVQAHTKVEAFSLMANDLRTVIEKFWWLFNKKLDHSPLFAAFAIQAAWRRHCKNKLERQSRLVMGEQKSSLGITVYASRFVAGTLGALRVRKALKANIVCTKV 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 200364 203367 - Conep14aG0002500.1 Cone14ag0024 451873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0024 664 SUPERFAMILY Voltage-gated potassium channels 87 395 - -
Cone14ag0024 664 Gene3D Jelly Rolls 471 587 IPR014710 -
Cone14ag0024 664 SMART cnmp_10 473 598 IPR000595 -
Cone14ag0024 664 Gene3D - 94 392 - -
Cone14ag0024 664 SUPERFAMILY cAMP-binding domain-like 402 590 IPR018490 -
Cone14ag0024 664 CDD CAP_ED 473 585 IPR000595 -
Cone14ag0024 664 ProSiteProfiles cAMP/cGMP binding motif profile. 473 556 IPR000595 -
Cone14ag0024 664 MobiDBLite consensus disorder prediction 1 39 - -
Cone14ag0024 664 Pfam Ion transport protein 109 397 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone14ag0024 664 Gene3D Helix hairpin bin 393 464 - -
Cone14ag0024 664 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 78 647 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0024 Cone-Chr14:200364 Cone15ag0027 Cone-Chr15:201417 6.18E-197 dispersed
Cone14ag0024 Cone-Chr14:200364 Cone14ag0025 Cone-Chr14:203913 7.70E-198 tandem
Cone1ag1209 Cone-Chr1:55940193 Cone14ag0024 Cone-Chr14:200364 3.39E-76 wgd
Cone11ag0487 Cone-Chr11:2478267 Cone14ag0024 Cone-Chr14:200364 2.78E-147 wgd
Cone14ag0024 Cone-Chr14:200364 Cone15ag0026 Cone-Chr15:198240 1.38E-268 wgd
Cone14ag0024 Cone-Chr14:200364 Cone18ag1018 Cone-Chr18:7534518 1.29E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0024 K05391 - csv:101214670 650.973