Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0036 ATGAAAGAGAAAAGAGAACACCTACTCTTGCTCAATATTCTATATGTCACTCTCTTGTTTGAAACTGTTTTTCCGCCTGCCTTTTCCGAACCGGTAGAAGATAAGCAAGCTTTGCTCGATTTCTACAACAACATAATTCACTCACCTTCACTCAATTGGAATGCTACTACTTCTCTCTGCAAAGATTGGGCAGGAGTTTATTGCAACTCTGATCAATCTAGAGTAATCGCCGTCCGATTGCCTGGGGCTCGTTTACTAGGTCCGATCCCGAACAACACTATTAGTCGCTTATCAGGACTTGAGATTCTAAGTCTCAGATTGAATGATATATCAGGTCCTTTCCCTTCGGATTTCTCGAAGCTAGAAAACTTGAACTCTATTTACCTGCAATTCAACAAGATTTCCGGCCCACTACCTTCGGATTTTTCGGTTTGGAAGAATCTTACCATCCTTGACTTATCCAACAATGCCTTCAACGGTACTATCCCATCTTCTATATCGAACTTGACTCACCTTCAAACTTTGAATCTTGCTAACAACTCGCTTACTGGTGAAATTCCGGACCTTAATATAACTAGTTTGCAGAAGTTAGATTTATCCAATAACAACCTTACGGGAAATGTCCCGAAATCGCTTCAACGATTTCCAAGCTTGGTATTCTCTGGTAACAATCTTACCCTTCATCAATCTGACCTTTCTCCAGCATCAGAAAAAAGCAAAAAACTCAGTGAATCAGCAATACTTGGGATTATACTAGGAGCTTGTGTTAGCGTGTTTGCATTAGCAGCCGTTGTGATGATCTTTTCCTCCCCTAGTGCAGAAACCGAAAATACAGCTGTCTCAAAGCCAAAAAATAAAGAAGCTTCTTCTAACAAAAAAACTTCCGAAATGGAAGACAAGAAAAACAATCTTACATTCTTCCAAGGGTCTAGACTAGCATTCAACTTGGACGACTTGTTAAGTTCGTCTGCTGAAATTCTCGGAAAAGGATTGCTTGGGACGAGTTACAAGGCGACTCTAGGGGATGGAACAACTGTGGTTGTGAAGAGGATAAAGGAAGTCAACATTTCGAGGAGAGAATTCGAGCATCAAATGGGAATTGTCGGGAAATTGCAGCACGAGAATGTGGTTGCTCCAAGAGCATATTATTATTCAAAAGAGGAAAAGCTCATAGTCTATGACTTTTACCAACATGGGAGTGTCTCTATTATGTTATATGATAAGAGAGGAGAGGGTCGGATTCCATTAGATTGGAAAACCCGAATAAGAATCGCAATTGGTGCGGCAAAAGGGATTGCTTATATCCATTCAGAATTGGGTGGAAAACTTGTTTATGGAAACATAAAAGCTTCTAACGTTTTTCTCAATTCTGGAGGATATGGTTGTGTCTCAGATTTCGGTTGGGTGACACTGGCAAGCCAAACGGCCCCACACGAAAGAAGGATTGCGGGATATATGGCTCCGGAAGTGAGAGATGCTCGGAAAGCATCCCATGCTTCTGATGTGTATAGTTTTGGGGTCTTTCTTCTTGAGCTTTTGACAGGGAAATCTCCCGTATTGGGCAGAGGGGGTGAAGAGGTTGTTAATTTGGTGAGATGGGTGAATTCTGTGGTCCGAGAAGAGTGGACTGCAGAGGTATTTGATGTTGAGCTGTTGAGGTACGCTAATATTGAGGAAGAACTTGTGGAGATGTTACACATAGCATTATCTTGTGCTGTGAGAGGGCCCGAGAATAGACCGAATATGGCTGACGTTGCAGCTCGGATCGAGCAAGTTGGCAGTCAAGGGAATCCGGGGAATCAACCGTCGTCGGAATCTGTATCAGAGTATTCAACACCGCCTCGTGTGACTGTCACTGAGATTGGATCGACATCAGATACTCGTTAA 1887 42.5 MKEKREHLLLLNILYVTLLFETVFPPAFSEPVEDKQALLDFYNNIIHSPSLNWNATTSLCKDWAGVYCNSDQSRVIAVRLPGARLLGPIPNNTISRLSGLEILSLRLNDISGPFPSDFSKLENLNSIYLQFNKISGPLPSDFSVWKNLTILDLSNNAFNGTIPSSISNLTHLQTLNLANNSLTGEIPDLNITSLQKLDLSNNNLTGNVPKSLQRFPSLVFSGNNLTLHQSDLSPASEKSKKLSESAILGIILGACVSVFALAAVVMIFSSPSAETENTAVSKPKNKEASSNKKTSEMEDKKNNLTFFQGSRLAFNLDDLLSSSAEILGKGLLGTSYKATLGDGTTVVVKRIKEVNISRREFEHQMGIVGKLQHENVVAPRAYYYSKEEKLIVYDFYQHGSVSIMLYDKRGEGRIPLDWKTRIRIAIGAAKGIAYIHSELGGKLVYGNIKASNVFLNSGGYGCVSDFGWVTLASQTAPHERRIAGYMAPEVRDARKASHASDVYSFGVFLLELLTGKSPVLGRGGEEVVNLVRWVNSVVREEWTAEVFDVELLRYANIEEELVEMLHIALSCAVRGPENRPNMADVAARIEQVGSQGNPGNQPSSESVSEYSTPPRVTVTEIGSTSDTR 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 262524 264485 - Conep14aG0003700.1 Cone14ag0036 451885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0036 628 Pfam Protein tyrosine and serine/threonine kinase 325 587 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0036 628 SUPERFAMILY Protein kinase-like (PK-like) 324 589 IPR011009 -
Cone14ag0036 628 ProSiteProfiles Protein kinase domain profile. 321 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0036 628 FunFam pollen receptor-like kinase 1 290 395 - -
Cone14ag0036 628 MobiDBLite consensus disorder prediction 593 628 - -
Cone14ag0036 628 FunFam Probable inactive receptor kinase RLK902 31 190 - -
Cone14ag0036 628 MobiDBLite consensus disorder prediction 275 297 - -
Cone14ag0036 628 Gene3D Transferase(Phosphotransferase) domain 1 397 609 - -
Cone14ag0036 628 Pfam Leucine rich repeat 145 182 IPR001611 GO:0005515(InterPro)
Cone14ag0036 628 PRINTS Leucine-rich repeat signature 191 204 - -
Cone14ag0036 628 PRINTS Leucine-rich repeat signature 148 161 - -
Cone14ag0036 628 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Cone14ag0036 628 MobiDBLite consensus disorder prediction 590 628 - -
Cone14ag0036 628 SUPERFAMILY L domain-like 34 225 - -
Cone14ag0036 628 Pfam Leucine Rich Repeat 123 143 IPR001611 GO:0005515(InterPro)
Cone14ag0036 628 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515(InterPro)
Cone14ag0036 628 PANTHER OS05G0588300 PROTEIN 8 601 IPR050994 -
Cone14ag0036 628 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 396 602 - -
Cone14ag0036 628 Gene3D Ribonuclease Inhibitor 190 248 IPR032675 -
Cone14ag0036 628 Gene3D Ribonuclease Inhibitor 32 189 IPR032675 -
Cone14ag0036 628 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515(InterPro)
Cone14ag0036 628 Gene3D Phosphorylase Kinase; domain 1 285 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0036 Cone-Chr14:262524 Cone8ag0259 Cone-Chr8:1498559 8.54E-159 dispersed
Cone14ag0036 Cone-Chr14:262524 Cone15ag0037 Cone-Chr15:259168 4.58E-128 wgd
Cone14ag0036 Cone-Chr14:262524 Cone5ag0660 Cone-Chr5:2816135 5.11E-181 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82063 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0036 - - - 0.0