Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0050 ATGGCAGATGACTGGGATCTGGCTGCGGTGGTGCGGGGCTGCAAGACAGACGCTTCCTCCTCCTCCGCCGCCTCCGTCGCAGCAACTGACGCAGGCAGGAGTACAGAATCACCATCAGGCGCTCTATCTTGCTTGGCTTCATTGACTTTCGAAGAGGAAAAAGACCCATTTTCTTTTCCCAATATTATACATCAAAACGATGATCCGTACTACTACTCATCTAGAATCAGTTATACCAATCATGGCTTTCAAGAGTTACAGCAACTAACCAAGCCCCTAATTTTCTGCAAAAACAACCTTGCTTCTTCCATCTCATCAGATTTGATCGGAGGAGGACCATCATCAAGTAGTTTGAACCACAACAATATCGGCCAAATACAGCACCACCCCCACCACCATTTACGTCATGTAAATATTATTAGGCCGCCGCCGAATAATAACTTCAATCTCAGACCGGCCTCCAATTTTGGAGGATTAAATCAATCTTTGCAAGAGCAGCAGCCTAATCATCCACCTTCTAATATTCCCGGTTTCCTTAACTCCCTTCCTCAGACCCCTAGAACTAGAAAAAGGAAAAGCCAACTGAAGAGAACTGTGTGCCATGTTACGGCGGAGAATCTCTCAAACGACGTGTGGGCATGGCGTAAATACGGGCAAAAGCCCATCAAGGGTTCTCCATATCCAAGGAATTATTACCGATGCAGCAGCTCCAAGGGATGTCCGGCAAGAAAACAGGTGGAGCGAAGCAACACTGACCCGAACATCTTTGTAATAACGTACTCCGGGGACCACACTCACCCTCGTCCCACTCACCGGAACTCTCTCGCCGGAAGTACCCGAAACAAGTATTCATCACAACCCGAAAAGGAGTTACCAGCTCCAAGCAAACTATCAGATCCTGATCACATAACGCCCATCAATTGTAGCAGCCTCTCTCCAACAACTCCATTAACAGTACAGAAGGAGGAGTTTTCAGCTAATTACCATCATCAAGCAACTCACCTCAAGGAGATTGTTACTACTACTTTCATTACTGGAGATCAAGACAAGGACAATATAGATGACGATCCTGGTCAGGAGTTGATTATGGCAGATAGTAATGATCAAGAGGATGGATTATTAATCATGGAGATGAGTAGTACTGATCATGATGAAATTTTCCAAGGTCTTCAAGAGCTTGATTCAAGCCCCGTTTAA 1197 45.7 MADDWDLAAVVRGCKTDASSSSAASVAATDAGRSTESPSGALSCLASLTFEEEKDPFSFPNIIHQNDDPYYYSSRISYTNHGFQELQQLTKPLIFCKNNLASSISSDLIGGGPSSSSLNHNNIGQIQHHPHHHLRHVNIIRPPPNNNFNLRPASNFGGLNQSLQEQQPNHPPSNIPGFLNSLPQTPRTRKRKSQLKRTVCHVTAENLSNDVWAWRKYGQKPIKGSPYPRNYYRCSSSKGCPARKQVERSNTDPNIFVITYSGDHTHPRPTHRNSLAGSTRNKYSSQPEKELPAPSKLSDPDHITPINCSSLSPTTPLTVQKEEFSANYHHQATHLKEIVTTTFITGDQDKDNIDDDPGQELIMADSNDQEDGLLIMEMSSTDHDEIFQGLQELDSSPV 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 312009 313554 - Conep14aG0005200.1 Cone14ag0050 451899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0050 398 MobiDBLite consensus disorder prediction 155 188 - -
Cone14ag0050 398 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0050 398 Gene3D WRKY domain 194 270 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0050 398 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 394 IPR044810 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone14ag0050 398 MobiDBLite consensus disorder prediction 260 301 - -
Cone14ag0050 398 MobiDBLite consensus disorder prediction 271 288 - -
Cone14ag0050 398 MobiDBLite consensus disorder prediction 155 196 - -
Cone14ag0050 398 SUPERFAMILY WRKY DNA-binding domain 202 269 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0050 398 SMART WRKY_cls 208 268 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0050 398 Pfam WRKY DNA -binding domain 209 267 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0050 398 FunFam WRKY transcription factor 22 191 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0050 Cone-Chr14:312009 Cone15ag0424 Cone-Chr15:2001244 5.44E-44 dispersed
Cone11ag0447 Cone-Chr11:2253478 Cone14ag0050 Cone-Chr14:312009 9.61E-47 wgd
Cone14ag0050 Cone-Chr14:312009 Cone14ag0387 Cone-Chr14:1810039 1.61E-49 wgd
Cone14ag0050 Cone-Chr14:312009 Cone15ag0055 Cone-Chr15:335860 1.22E-196 wgd
Cone14ag0050 Cone-Chr14:312009 Cone15ag0446 Cone-Chr15:2087514 2.58E-15 wgd
Cone14ag0050 Cone-Chr14:312009 Cone18ag1061 Cone-Chr18:7777622 1.77E-48 wgd
Cone14ag0050 Cone-Chr14:312009 Cone6ag0812 Cone-Chr6:4127490 1.07E-39 wgd
Cone14ag0050 Cone-Chr14:312009 Cone9ag0811 Cone-Chr9:3902804 2.88E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44695 PF00520 Ion_trans 2.10E-32 CL0030 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0050 - - - 0.0