Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0063 ATGCAATCTGGGTTCACCGGAGGTGACGTTCCGGACGTGTACAGCACCAGCAGAGCGATCGGAACTGCCATGGCTAACCACCACCCATCATCTCAGCAAAACCCATACAGATCCCTACTTCCCGGAGGCTCCAATTTCATCGGCCCAACGTCCCAAATGTCGCGCCAAATCCCACCAACCTCCTCCACCGTGATCGGAAAACGCTCCCTCGCCGATTTCCGAACCCAATACCAACACAACCAAGCCCTAAGCAACCTTTTACTCCGCTCTGTAAAACCCAGAACTTACAACCATCAGCCATCACCTGTTTCCCATCTTTCTCACATCGATTTCTCTTCAACGATGTCGTTTCCGATTTCGTCTGAGCTTCAATCTCACCGCCTTCTTCAGCAACTCCGCCCTCACCCGATGTCTACACCCATGACCAATTCGGGCCTCCCTGGGCTACCTTATTCCGGGCCTGTTCAGACCCGGTCCGTTTCTGCCCACGAATCTGAGACGAAGATGATGAATCACCGCCTTCAGGAGCTCGAGAAACAGCTTCTAGACGATAACGATGAAGATGACGCAGCCGATGAAGTTTCTGTGATCACTAATACAAACAGCGAGTGGTCGGAAACAATACAGAATCTGATCAGTCCGACTCAGTGCCAGAGCCAGAGTCAGAAATCAATCTCTCCCTCTCCGACTTCTTCAACGTTGTCTTCTTCTTCGTCGTCTTCATCTGTAGGTTCTCAAGCTTCCTTGTGCTGGAAACAGTCTGTCATGGAGGCTGCCTCTGTCATTTATGAAGGTAAATCGGAGCAAGCAACAGAGATCCTAATGCGCGTTTCGTGTCAAATTCCAAACGTTAAAGTTCATTCTGAACAGAGGTTGATGGAGTTCATGATTTCCGCTCTGAAATCGCGTTTAAATGCGATGGAAAACCCGCCGCCGGTTGCAGAGCTGTATGATCTCGAACACACCGCGTCGACTCAGTTGCTATACGAGGTCTCTCCCTGTTTCAAACTCAGCTTCTTAGCAGCCAATCTCGCCATTCTGGAAGCTGTTGCTGTTCAAGGTGAAGAGAGCAATTGCAGTAAATTTCATGTCTTGGATTTTGATATAGGTGAAGGCGGTCAGTATCTGAATCTTCTTCACATGCTCTCGACGCAACGTCAGAGCGGGACGAAGCCCCCGGCAGCCGTTTTCAAGCTGACAACTATGGCAGAAAACGGTGGTGAAGAGAGGTTGAAGAAAGTGAGCGAAATGCTGAGTCAACACGCTGAACTCGTCGGTGTGAGTTTTAAATTAAACGTTATCAGTTCGATGCAGGTGTCCGATTTGAATCGCAACTCACTGGGTTGCGAACCGGAAGAACCGCTCGCCGTGAATTTCGCTTTCAAATTGTACAGGATGCCAGACGAGAGCGTATCAACAGAGAATCCACGAGACGAGCTTCTCCGGCGCGTGAAGGGATTATCCCCCCGCGTCGTGACGGTTGTCGAGCAGGAGATGAACACAAACACGGCCCCGTTTCCGACTCGCGTGACGGAAACGAGCTCGTACTACGGGGCGCTGTTCGACTCGATCGAGTCGACCGTGGGAAGGGATAACTCGGACCGAGTCAAAGTAGAGGAAGGACTGGGTCGAAAGCTGGTTAACTCGATTGCTTGTGAAGGGAGGGACCGAGTTGAGAGATGCGAGGTTTTCGGTAAGTGGCGGTCCCGGTTGGGAATGGCGGGGTTCGAGTTGAAGCCACTGAGTCAAAACGTTGCTGAGTCGATGAGAAATCGACTGAGCACAGGGTCCCGAGTAAATCCTGGTTTCACCGTTAAGGAAGAGAACGGAGGCGTTTGCTTTGGGTGGTTAGGTCGGACTCTTACCGTCGCATCTGCGTGGCGTTAA 1887 51.25 MQSGFTGGDVPDVYSTSRAIGTAMANHHPSSQQNPYRSLLPGGSNFIGPTSQMSRQIPPTSSTVIGKRSLADFRTQYQHNQALSNLLLRSVKPRTYNHQPSPVSHLSHIDFSSTMSFPISSELQSHRLLQQLRPHPMSTPMTNSGLPGLPYSGPVQTRSVSAHESETKMMNHRLQELEKQLLDDNDEDDAADEVSVITNTNSEWSETIQNLISPTQCQSQSQKSISPSPTSSTLSSSSSSSSVGSQASLCWKQSVMEAASVIYEGKSEQATEILMRVSCQIPNVKVHSEQRLMEFMISALKSRLNAMENPPPVAELYDLEHTASTQLLYEVSPCFKLSFLAANLAILEAVAVQGEESNCSKFHVLDFDIGEGGQYLNLLHMLSTQRQSGTKPPAAVFKLTTMAENGGEERLKKVSEMLSQHAELVGVSFKLNVISSMQVSDLNRNSLGCEPEEPLAVNFAFKLYRMPDESVSTENPRDELLRRVKGLSPRVVTVVEQEMNTNTAPFPTRVTETSSYYGALFDSIESTVGRDNSDRVKVEEGLGRKLVNSIACEGRDRVERCEVFGKWRSRLGMAGFELKPLSQNVAESMRNRLSTGSRVNPGFTVKEENGGVCFGWLGRTLTVASAWR 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 349890 352297 - Conep14aG0006500.1 Cone14ag0063 451912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0063 628 Pfam GRAS domain family 253 628 IPR005202 -
Cone14ag0063 628 MobiDBLite consensus disorder prediction 25 62 - -
Cone14ag0063 628 Coils Coil 160 180 - -
Cone14ag0063 628 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 235 627 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone14ag0063 628 MobiDBLite consensus disorder prediction 213 243 - -
Cone14ag0063 628 ProSiteProfiles GRAS family profile. 242 628 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0063 Cone-Chr14:349890 Cone4ag1449 Cone-Chr4:11499843 9.56E-82 dispersed
Cone14ag0063 Cone-Chr14:349890 Cone15ag0066 Cone-Chr15:372697 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44697 PF00179 UQ_con 5.80E-54 CL0208 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0063 K27748 - csv:101214171 641.728