Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0104 ATGGATGATTTTATGGAGAATTTTGATTCGAGTAAAGGGGTGATGTTGAGGGATGATATTGAGTATGATAGCAGATCAGGCAGCGATAATAATTGCGATGCCCCTTTTGATGACGACCAGGATCTGGCTAATGTACAGCCATCCCGGAAAAAGAAGTACCATAGACATACTCCCCTTCAAATTCAAGAGCTGGAAAATTTCTTCAAGCTGTGTCCTCATCCTGATGAAAAACAGAGAGGTGAACTCGGCAGGAGGCTTAGCTTGGAGCCAAAGCAAGTCAAGTTTTGGTTTCAGAATCGACGAACTCAGATGAAGACTCAATTGGAACGGCATGAGAACTTAATTCTACGACAAGAAAATGATAAGCTCCAGGCAGAAAACAGCATGATGAAGGAATCCATATCAAGCCCAGTATGCAACACTTGTGGTGGGCCCACCATGTTTGGTCAGGTGCCATTTGAGGAGAATCGGCTTAGGCTTGAGAATGCTAGACTAGGGGAAGAAATAAACCGGATATGTGCTATATCTAGTACGTTTCTTGGCAGGTCACTTTCTTCACCCTTGGCTAATCTCGACTCCTTTCCTCCAAGCTCCATCTCTAGTTTAGAACTTGGGCTTTCCGGCTTGAATGGTTTCAACAATAATGCTCATGCTTTGGTACCAACTGAACTTAATTTGGGAGATGGAATATTTACGAGTTCTTCACTTCTTAAGCCGGAAATAGGCCGAGCGCGGAATGAAATCCCTTTGGAGAAAACGTGGTTTGTGGATCTTGCAATGTTTGCCCTGGATGAATTAGTTAAAATGGCACAATCTGATGATCCCTTATGGATCAAAAGTTTAAATGGAGGGAAAGAGACATTGAACTGCGAAGAATACAATAAGACATTTAGTTCGTGTATCGGAAGTAAATCAAACAATTGGGTTAGTGAAGGAACAAGAGATGCTAGTATGGTCATTATTAATAGCTTGGCTCTTGTTGAGACCTTGATGGATGCGAATCGGTGGGCAGAAATGTTTCCTTGCCTGATAGCTAGAGCCTCCACCATTGATATCATATCGAGCAGCATGGATGGGACCTGCAATGGGACCATACAGTTGATGTGTGCCGAGCTGCAAGTGCTCTCACCATTGGTTCCTGTCCGTCCTATCAAGTTCCTCCGATTCTGCAAGCAGCATGCAGATGGTGTGTGGGCCGTGGTTGATGTTTCAATCGATTTCAATTCAAACCCATATCTCAATTGTCGGAAGCTTCCTTCTGGCTGCATCGTGCAAGATATGCCTAATGGTTACTCAAAGGTTACTTGGATTGAACATATTGAATACGACGAATGCATAATCCACCCACTCTACCAGAAAGTAATCAGTTCTGGCTTGGGCTTCGGTGCAAAGCGTTGGCTCACTACTCTCCAAAGACAGTGTGAATGCTTGTCAATTCTCATGTCTTATTCCAACAACACGAATGAAGATCCATCAGGAATGACAATGAGTGGTCGGAGAAGCATGTTAAAGCTTGCACGGCGTATGGTTGATAACTTCTGTTCTGGAATTTGTGCTTCAACTGCTTGGAAATGGGACAAGTTAGCTGTCGATAATGTGAGCCAGGATGTCAAGATGATGGCTAGGAAGAGTCTAAATGACCCAGGGGAACCACCTGGGATCGTTCTAAGTGCTGCTACTTCAGTTTGGATGCCCGTTTCGCACCAGAGACTGTTCGGTTTCCTGCAGGACGGAAGTTTGAGGAGCGAGTGGGACGTTCTGTCCAATGGTGGGCCCATGCAAGAGATGGTCCACGTCGCTAAGGGATGTGATGCGGAAACCAATCGTGTTTCTCTCCTTCGCAGCAATCCCAGTGCTAACACGACATCTACAATGTTGATTTTTCAGGAGACTTGTGTGGACCCACATGTGGGATCCTTAGTTGTTTATGCTCCAGTCGATACACCGTCGGTCAATATGGTAATGAATGGTGGAGACTCTGCTTACGTGCCTTTGCTGCCATCTGGGTTTGCGATTCTTCCGCATGTGGGACCCGAGCCGGACAAGGGCAGGGATGGGACAGAAAGCAGTGGATGTTTGCTCACGGTTGGGTTCCAAATTTTGGTTAACAGCCTTCCAACTTCTAAGCTTACTGCCGAATCGATTGAGACGGTTAACAACCTCATTTCTTGCACCATTGGGAAGATCAAAGCTGCTCTTGGCTAA 2205 45.44 MDDFMENFDSSKGVMLRDDIEYDSRSGSDNNCDAPFDDDQDLANVQPSRKKKYHRHTPLQIQELENFFKLCPHPDEKQRGELGRRLSLEPKQVKFWFQNRRTQMKTQLERHENLILRQENDKLQAENSMMKESISSPVCNTCGGPTMFGQVPFEENRLRLENARLGEEINRICAISSTFLGRSLSSPLANLDSFPPSSISSLELGLSGLNGFNNNAHALVPTELNLGDGIFTSSSLLKPEIGRARNEIPLEKTWFVDLAMFALDELVKMAQSDDPLWIKSLNGGKETLNCEEYNKTFSSCIGSKSNNWVSEGTRDASMVIINSLALVETLMDANRWAEMFPCLIARASTIDIISSSMDGTCNGTIQLMCAELQVLSPLVPVRPIKFLRFCKQHADGVWAVVDVSIDFNSNPYLNCRKLPSGCIVQDMPNGYSKVTWIEHIEYDECIIHPLYQKVISSGLGFGAKRWLTTLQRQCECLSILMSYSNNTNEDPSGMTMSGRRSMLKLARRMVDNFCSGICASTAWKWDKLAVDNVSQDVKMMARKSLNDPGEPPGIVLSAATSVWMPVSHQRLFGFLQDGSLRSEWDVLSNGGPMQEMVHVAKGCDAETNRVSLLRSNPSANTTSTMLIFQETCVDPHVGSLVVYAPVDTPSVNMVMNGGDSAYVPLLPSGFAILPHVGPEPDKGRDGTESSGCLLTVGFQILVNSLPTSKLTAESIETVNNLISCTIGKIKAALG 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 484646 487611 - Conep14aG0010700.1 Cone14ag0104 451953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0104 734 Coils Coil 101 128 - -
Cone14ag0104 734 FunFam Homeobox-leucine zipper protein GLABRA 2 257 475 - -
Cone14ag0104 734 CDD homeodomain 50 107 IPR001356 GO:0003677(InterPro)
Cone14ag0104 734 CDD START_ArGLABRA2_like 255 475 - -
Cone14ag0104 734 SMART HOX_1 49 111 IPR001356 GO:0003677(InterPro)
Cone14ag0104 734 SUPERFAMILY Bet v1-like 249 476 - -
Cone14ag0104 734 SMART START_1 257 476 IPR002913 GO:0008289(InterPro)
Cone14ag0104 734 SUPERFAMILY Homeodomain-like 35 107 IPR009057 -
Cone14ag0104 734 FunFam Homeobox-leucine zipper protein HDG1 37 123 - -
Cone14ag0104 734 ProSiteProfiles 'Homeobox' domain profile. 47 107 IPR001356 GO:0003677(InterPro)
Cone14ag0104 734 Gene3D - 38 123 - -
Cone14ag0104 734 Pfam START domain 262 476 IPR002913 GO:0008289(InterPro)
Cone14ag0104 734 SUPERFAMILY Bet v1-like 505 727 - -
Cone14ag0104 734 ProSiteProfiles START domain profile. 248 479 IPR002913 GO:0008289(InterPro)
Cone14ag0104 734 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 27 733 IPR042160 -
Cone14ag0104 734 MobiDBLite consensus disorder prediction 22 42 - -
Cone14ag0104 734 Pfam Homeodomain 50 105 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0104 Cone-Chr14:484646 Cone8ag1442 Cone-Chr8:11179665 6.56E-225 dispersed
Cone11ag0406 Cone-Chr11:2008083 Cone14ag0104 Cone-Chr14:484646 3.34E-298 wgd
Cone14ag0104 Cone-Chr14:484646 Cone15ag0108 Cone-Chr15:520933 0 wgd
Cone14ag0104 Cone-Chr14:484646 Cone15ag0360 Cone-Chr15:1665508 1.40E-221 wgd
Cone14ag0104 Cone-Chr14:484646 Cone18ag1103 Cone-Chr18:8049457 1.56E-300 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44699 PF02416 TatA_B_E 5.90E-24 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0104 K09338 - csv:101218216 905.975