Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0141 ATGATGATAGCAAAGCTGAGAGATAGATGGAGAGATCATCTTGTTTTGCTGGCTAATCCTTGGTGGGCAGGTCAGTTGGGACTGCCGGCCGGTCTCAATCTGGCAGCCAATAATTCACCCTTCTTAAAACTACCCAATCGCAATGACCTATCTATAACTGAAACTAGCGGTGGAAGAAGTACTGGAAGTACTAGAGATGACGATGAGGACGGAGATAATGGATCGGACGAGCCGAAAGAAGGAGCCGTTGAGGTTGGAACCCGTCGGCCCAGAGGCCGGCCCCCCGGATCCAAAAACAAGCCCAAGCCCCCCATTTTCGTAACCCGAGACAGTCCGAACGCGCTCCGGAGCCATGTCATGGAGATTTCTGGAGGTGCCGATGTGGCAGATAGCGTAGCTCAATTCGCTCGGAGGCGTCAGAGAGGAGTTTGTATTCTAAGCGGTAGCGGCTCGGTGGCCAATGTAACCCTAAGACAGCCAGCTGCGCCTGGAGCTGTAGTTGCGCTTTGTGGAAGGTTCGAAATTCTATCTTTGACCGGATCATTTCTGCCTGGACCTGCCCCTCCTGGCTCGACCGGATTGACTGTTTATCTAGCCGGAGCTCAGGGGGAGGTTGTGGGTGGGAGTGTTGTCGGATCGTTAGTTGCAGCTGGGCCAGTGATCATAATTGCTGCAACTTTTTCCAATGCTACATATGAGAGGTTACCTCTTGAAGATGACGATCAAGATCAGGCCGGGGCAGGGGCCAGTCCCAGGCATGGCGATGCTGGCATCTCTCCGCCTGCAATCGGGCCTGTGCATAGTGGGCTGATGCAGCATGGGCTACCCTCTGATCCTGCCACGGCGGCTGTGGTTTACAATCAGCAGCCTCCAAATTCGCTTCCTAATGGAGGGCACTTAGGGCATGATGCGTATACTTGGGCTCATGGCCGTCCACCTTACTGA 945 54.07 MMIAKLRDRWRDHLVLLANPWWAGQLGLPAGLNLAANNSPFLKLPNRNDLSITETSGGRSTGSTRDDDEDGDNGSDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEISGGADVADSVAQFARRRQRGVCILSGSGSVANVTLRQPAAPGAVVALCGRFEILSLTGSFLPGPAPPGSTGLTVYLAGAQGEVVGGSVVGSLVAAGPVIIIAATFSNATYERLPLEDDDQDQAGAGASPRHGDAGISPPAIGPVHSGLMQHGLPSDPATAAVVYNQQPPNSLPNGGHLGHDAYTWAHGRPPY 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 683830 685381 - Conep14aG0014500.1 Cone14ag0141 451990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0141 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 66 314 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone14ag0141 314 Gene3D - 115 244 - -
Cone14ag0141 314 MobiDBLite consensus disorder prediction 43 112 - -
Cone14ag0141 314 PIRSF ESCAROLA 35 314 IPR014476 GO:0003680(InterPro)
Cone14ag0141 314 SUPERFAMILY AF0104/ALDC/Ptd012-like 112 241 - -
Cone14ag0141 314 MobiDBLite consensus disorder prediction 240 274 - -
Cone14ag0141 314 Pfam Plants and Prokaryotes Conserved (PCC) domain 116 228 IPR005175 -
Cone14ag0141 314 FunFam AT-hook motif nuclear-localized protein 115 242 - -
Cone14ag0141 314 ProSiteProfiles PPC domain profile profile. 112 251 IPR005175 -
Cone14ag0141 314 CDD DUF296 116 202 IPR005175 -
Cone14ag0141 314 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0141 Cone-Chr14:683830 Cone3ag0681 Cone-Chr3:3469813 6.78E-115 dispersed
Cone14ag0141 Cone-Chr14:683830 Cone15ag0149 Cone-Chr15:720428 1.54E-187 wgd
Cone14ag0141 Cone-Chr14:683830 Cone15ag0333 Cone-Chr15:1527904 8.09E-18 wgd
Cone14ag0141 Cone-Chr14:683830 Cone18ag1132 Cone-Chr18:8173667 1.80E-78 wgd
Cone14ag0141 Cone-Chr14:683830 Cone4ag0307 Cone-Chr4:1405303 6.44E-79 wgd
Cone14ag0141 Cone-Chr14:683830 Cone4ag1300 Cone-Chr4:10726530 4.86E-45 wgd
Cone14ag0141 Cone-Chr14:683830 Cone6ag0720 Cone-Chr6:3625087 1.06E-21 wgd
Cone14ag0141 Cone-Chr14:683830 Cone7ag0306 Cone-Chr7:1330720 1.03E-27 wgd
Cone14ag0141 Cone-Chr14:683830 Cone8ag0353 Cone-Chr8:2019529 5.22E-81 wgd
Cone14ag0141 Cone-Chr14:683830 Cone9ag0724 Cone-Chr9:3455326 2.00E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0141 - - - 0.0