Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0147 ATGCTCCTCTACGGCCTCCTTTCCAGATTATCCCCACCACAAGAATCGATAACAAATCCAATCAAGGAAGAAGAGGTCGACTCCGCTTCCGAAGAAAACCCGAAAAGTGAAAAATCGTATAGAGGAGTTAGGCGACGGCCGTGGGGGAAGTATGCTGCAGAGATAAGGGATTCGACGAGAAACGGCCGGAGAGTGTGGTTAGGAACATTTGACAGCCCTGAAGCTGCGGCTTTGGCATATGATCAGGCGGCGTTTTCGATGAGAGGTTCGACAGCAATCCTCAATTTTCCGGTGGAGAGAGTGAGCGAGTCCTTGAGGGAAATGAACTGTGGTTCTTCTTCCGACGGGAACGAGAATGAGAATGGTTCGCCTGTATTGGCTTTGAAAAGAAAGCATTCCATGAGGAGACAAATAGTAAGGAAGAAGACGTGTATTAGTAAAAATAGCGATGTGAAGAAGAAAAACGTTGTCGTTTTGGAAGATTTAGGTGCGGATTATTTGGAAGAGCTTTTAGGATCATCTGAAAGTAGTAGTAGCAGCAGCACTACTACTACAACTACCCTTTACGCTTAG 573 46.07 MLLYGLLSRLSPPQESITNPIKEEEVDSASEENPKSEKSYRGVRRRPWGKYAAEIRDSTRNGRRVWLGTFDSPEAAALAYDQAAFSMRGSTAILNFPVERVSESLREMNCGSSSDGNENENGSPVLALKRKHSMRRQIVRKKTCISKNSDVKKKNVVVLEDLGADYLEELLGSSESSSSSSTTTTTTLYA 190
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 709723 710295 + Conep14aG0015100.1 Cone14ag0147 451996
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0147 190 ProSiteProfiles AP2/ERF domain profile. 39 97 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0147 190 SMART rav1_2 39 103 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0147 190 MobiDBLite consensus disorder prediction 20 43 - -
Cone14ag0147 190 MobiDBLite consensus disorder prediction 11 43 - -
Cone14ag0147 190 PANTHER DNA-BINDING DOMAIN 27 164 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Cone14ag0147 190 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0147 190 PRINTS Ethylene responsive element binding protein signature 79 99 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0147 190 SUPERFAMILY DNA-binding domain 39 99 IPR016177 GO:0003677(InterPro)
Cone14ag0147 190 Gene3D AP2/ERF domain 38 99 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0147 190 FunFam Ethylene-responsive transcription factor 2 38 99 - -
Cone14ag0147 190 Pfam AP2 domain 39 90 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0147 190 CDD AP2 38 98 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0147 Cone-Chr14:709723 Cone15ag0157 Cone-Chr15:750525 1.36E-98 dispersed
Cone14ag0147 Cone-Chr14:709723 Cone15ag0156 Cone-Chr15:745558 9.50E-29 wgd
Cone14ag0147 Cone-Chr14:709723 Cone4ag0322 Cone-Chr4:1457242 1.51E-25 wgd
Cone14ag0147 Cone-Chr14:709723 Cone7ag0317 Cone-Chr7:1375445 1.44E-21 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44705 PF01161 PBP 3.40E-14 No_clan Cone TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0147 K14516 - cit:102611538 218.009