Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone14ag0147 | ATGCTCCTCTACGGCCTCCTTTCCAGATTATCCCCACCACAAGAATCGATAACAAATCCAATCAAGGAAGAAGAGGTCGACTCCGCTTCCGAAGAAAACCCGAAAAGTGAAAAATCGTATAGAGGAGTTAGGCGACGGCCGTGGGGGAAGTATGCTGCAGAGATAAGGGATTCGACGAGAAACGGCCGGAGAGTGTGGTTAGGAACATTTGACAGCCCTGAAGCTGCGGCTTTGGCATATGATCAGGCGGCGTTTTCGATGAGAGGTTCGACAGCAATCCTCAATTTTCCGGTGGAGAGAGTGAGCGAGTCCTTGAGGGAAATGAACTGTGGTTCTTCTTCCGACGGGAACGAGAATGAGAATGGTTCGCCTGTATTGGCTTTGAAAAGAAAGCATTCCATGAGGAGACAAATAGTAAGGAAGAAGACGTGTATTAGTAAAAATAGCGATGTGAAGAAGAAAAACGTTGTCGTTTTGGAAGATTTAGGTGCGGATTATTTGGAAGAGCTTTTAGGATCATCTGAAAGTAGTAGTAGCAGCAGCACTACTACTACAACTACCCTTTACGCTTAG | 573 | 46.07 | MLLYGLLSRLSPPQESITNPIKEEEVDSASEENPKSEKSYRGVRRRPWGKYAAEIRDSTRNGRRVWLGTFDSPEAAALAYDQAAFSMRGSTAILNFPVERVSESLREMNCGSSSDGNENENGSPVLALKRKHSMRRQIVRKKTCISKNSDVKKKNVVVLEDLGADYLEELLGSSESSSSSSTTTTTTLYA | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 709723 | 710295 | + | Conep14aG0015100.1 | Cone14ag0147 | 451996 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone14ag0147 | 190 | ProSiteProfiles | AP2/ERF domain profile. | 39 | 97 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone14ag0147 | 190 | SMART | rav1_2 | 39 | 103 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone14ag0147 | 190 | MobiDBLite | consensus disorder prediction | 20 | 43 | - | - | |
Cone14ag0147 | 190 | MobiDBLite | consensus disorder prediction | 11 | 43 | - | - | |
Cone14ag0147 | 190 | PANTHER | DNA-BINDING DOMAIN | 27 | 164 | IPR044808 | GO:0003700(InterPro)|GO:0009873(InterPro) | |
Cone14ag0147 | 190 | PRINTS | Ethylene responsive element binding protein signature | 40 | 51 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone14ag0147 | 190 | PRINTS | Ethylene responsive element binding protein signature | 79 | 99 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone14ag0147 | 190 | SUPERFAMILY | DNA-binding domain | 39 | 99 | IPR016177 | GO:0003677(InterPro) | |
Cone14ag0147 | 190 | Gene3D | AP2/ERF domain | 38 | 99 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone14ag0147 | 190 | FunFam | Ethylene-responsive transcription factor 2 | 38 | 99 | - | - | |
Cone14ag0147 | 190 | Pfam | AP2 domain | 39 | 90 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone14ag0147 | 190 | CDD | AP2 | 38 | 98 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0147 | Cone-Chr14:709723 | Cone15ag0157 | Cone-Chr15:750525 | 1.36E-98 | dispersed | |
Cone14ag0147 | Cone-Chr14:709723 | Cone15ag0156 | Cone-Chr15:745558 | 9.50E-29 | wgd | |
Cone14ag0147 | Cone-Chr14:709723 | Cone4ag0322 | Cone-Chr4:1457242 | 1.51E-25 | wgd | |
Cone14ag0147 | Cone-Chr14:709723 | Cone7ag0317 | Cone-Chr7:1375445 | 1.44E-21 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44705 | PF01161 | PBP | 3.40E-14 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone14ag0147 | K14516 | - | cit:102611538 | 218.009 |