Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0171 ATGAAGAAGGTAGCGGTAATTGGAGGCGGGATAAGCGGGATGGTTTCGGCTTATGTTTTGGCGAAAGCCGGAGTGGAAGTGGTAACATATCCAAATATGATGAAGAACTGCATCATGTTCAAGGAAAGAGAAGAATCTGGTTTTCCAACATGTTTAGCCTCTGCTAAATACTTCTTCCAACATGTTTCGAGACAGAACACTCTAACACAAGGTCATCGGAACATCTCTCGTCATTATGATCTGAGTAAAGAACTTTTCGCCCTGTTCTTGGACGAGACGATGACATATTCTTGTGCAGTGTTTAAGGCAAGTGGTACTATGATTTTTGTTACTTGCTATTGTTTCAGTGAGATGATTGAAGCTGTAGGGCATGAGTTCATGGACGAGTTTTTCGGTTTCTGTGAATCTGTTCTAGCAGAAGATGGGTTCCTTGTTCTACAGCAAAATACTTGCGGATTCGATGAAGAATTCATCCAGAGATGGGAATACTATTTCGATTACTGCGGTGCCGGATTTAAATCCTACACGCTCGGAAATTACCAGATCATCTTCTCGCGTCCGGGCAAAGTTGCGGCATTCAACAGCAATGCATACAAAAGCTTTACATTCAGCTGTGACATTGAAACTTAG 630 42.22 MKKVAVIGGGISGMVSAYVLAKAGVEVVTYPNMMKNCIMFKEREESGFPTCLASAKYFFQHVSRQNTLTQGHRNISRHYDLSKELFALFLDETMTYSCAVFKASGTMIFVTCYCFSEMIEAVGHEFMDEFFGFCESVLAEDGFLVLQQNTCGFDEEFIQRWEYYFDYCGAGFKSYTLGNYQIIFSRPGKVAAFNSNAYKSFTFSCDIET 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 806370 807881 + Conep14aG0017500.1 Cone14ag0171 452020

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0171 209 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 187 IPR029063 -
Cone14ag0171 209 Gene3D Vaccinia Virus protein VP39 57 108 IPR029063 -
Cone14ag0171 209 Gene3D - 1 33 IPR036188 -
Cone14ag0171 209 PANTHER ARSENITE METHYLTRANSFERASE 41 102 IPR026669 GO:0008168(PANTHER)
Cone14ag0171 209 SUPERFAMILY FAD/NAD(P)-binding domain 1 49 IPR036188 -
Cone14ag0171 209 Pfam Mycolic acid cyclopropane synthetase 69 104 - -
Cone14ag0171 209 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 56 105 IPR029063 -
Cone14ag0171 209 Gene3D Vaccinia Virus protein VP39 109 191 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0171 K00574 - - ath:AT3G23460 131.339
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0171 Cone-Chr14:806370 Cone15ag0178 Cone-Chr15:855199 6.33E-48 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g761 . . . . . . . . . . . . . . . . . . . . . . . . Cla06g00687 Cam06g0738 Cec06g0745 Cco06g0756 Clacu06g0729 Cmu06g0713 Cre06g1488 Cone14ag0171 Cone15ag0178 . . . Csa02g01038 Chy05g00302 . . . . . Bpe05g01103 . . . . . . . . . . . . Bhi12g01577 . . . . . . . . . . . . . Lsi09g01206 . . Cme05g00600
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000328 0 12 1 1 1 5 7 9 6 3 5 6 4 6 8 3 7 2 2 5 3 2 3 6 5 10 3 4 3 2 134