Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0233 ATGGGCAAGGAAAAGGTTCACATTAACATTGTGGTCATTGGCCATGTCGACTCTGGAAAGTCAACCACTACCGGTCACCTTATCTACAAGCTTGGAGGAATTGACAAGCGTGTGATCGAGAGGTTTGAGAAGGAAGCAGCTGAGATGAACAAGAGGTCATTCAAGAGCTGGCTGAGCGTGAGCGTGTTTGAGACCACCAAGTACTACTGCACTGTTATTGATGCTCCTGGGCATAGGGATTTCATTAAGAACATGATTACTGGAACATCACAGGCAGATTGTGCAGTTCTTATTATTGATTCCACTACTGGTGGTTTCGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAGCACGCTCTTCTTGCTTTCACTCTTGGTGTCAAGCAAATGATTTGCTGCTGTAACAAGATGGATGCCACCACACCTAAGTACTCAAAGGCAAGGTATGATGAAATTATTAAGGAAGTCTCATCTTACCTGAAGAAGGTTGGATACAACCCAGACAAAATTCCTTTTGTCCCCATCTCCGGTTTTGAGGGTGACAACATGATTGAAAGATCCACCAACCTCGACTGGTACAAGGGCCCAACCCTTCTTGAAGCCCTTGACCAAATCAACGAGCCTCCCAAGAGGCCTTCCGACAAGCCCCTCCGTCTCCCACTTCAGGATGTCTACAAGATCGGTGGTATCGGAACTGTCCCAGTGGGCCGAGTTGAAACTGGTGTCGTGAAGCCCGGTATGGTTGTCACCTTCGGCCCTACTGGTCTGACCACTGAAGTCAAATCTGTTGAGATGCACCACGAGGCTCTCCTAGAAGCCCTTCCAGGTGACAACGTAGGATTCAACATCAAGAATGTTGCTGTCAAGGATCTGAAGAGAGGTTTTGTTGCATCAAACTCTAAGGATGATCCGGCCAAGGAAATCGGAAATGGATACGCCCCAGTTCTTGATTGCCACACCTCCCACATTGCTGTCAAATTTGCTGAGATTTTGACCAAGATCGACAGGCATTCTGGTAAGGAGATCGAGAAGGAGCCCAAGTTTTTGAAGAATGGTGATGCAGGTATGGTTAAGATGATTCCGACCAAGCCCATGGTGGTCGAAACCTTCTATGAGTACCCTCCATTGGGTCGTTTTGCTGTCAGGGACATGCGTCAAACTGTTGCTGTCGGTGTCATCAAGAGCGTTGAGAAGAAGGATCCATCTGGTGCTAAGGTCACCAAATCTGCTGCCAAGAAGAAGTAA 1248 47.68 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKSWLSVSVFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVVKPGMVVTFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNIKNVAVKDLKRGFVASNSKDDPAKEIGNGYAPVLDCHTSHIAVKFAEILTKIDRHSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFYEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKKK 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1081526 1083377 - Conep14aG0023800.1 Cone14ag0233 452082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0233 415 Pfam Elongation factor Tu domain 2 232 297 IPR004161 GO:0005525(InterPro)
Cone14ag0233 415 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 306 397 IPR009001 -
Cone14ag0233 415 PRINTS GTP-binding elongation factor signature 87 98 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0233 415 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0233 415 PRINTS GTP-binding elongation factor signature 131 140 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0233 415 PRINTS GTP-binding elongation factor signature 71 81 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0233 415 FunFam Elongation factor 1-alpha 302 398 - -
Cone14ag0233 415 FunFam Elongation factor 1-alpha 1 209 - -
Cone14ag0233 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 233 IPR027417 -
Cone14ag0233 415 PANTHER TRANSLATION FACTOR 4 395 IPR050100 GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0006412(PANTHER)|GO:0006414(PANTHER)
Cone14ag0233 415 FunFam Elongation factor 1-alpha 213 300 - -
Cone14ag0233 415 CDD EF1_alpha 9 210 - -
Cone14ag0233 415 CDD EF1_alpha_III 304 394 - -
Cone14ag0233 415 CDD EF1_alpha_II 214 304 - -
Cone14ag0233 415 SUPERFAMILY Translation proteins 215 305 IPR009000 -
Cone14ag0233 415 NCBIfam translation elongation factor EF-1 subunit alpha 1 401 IPR004539 GO:0003746(InterPro)|GO:0005525(InterPro)|GO:0006414(InterPro)
Cone14ag0233 415 Gene3D Translation factors 300 398 - -
Cone14ag0233 415 Gene3D - 1 211 IPR027417 -
Cone14ag0233 415 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 211 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0233 415 Gene3D Translation factors 213 299 - -
Cone14ag0233 415 Pfam Elongation factor Tu GTP binding domain 6 206 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0233 415 Pfam GTP-eEF1A C-terminal domain-like 307 395 IPR054696 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0233 Cone-Chr14:1081526 Cone5ag1214 Cone-Chr5:5557356 1.47E-285 dispersed
Cone15ag1096 Cone-Chr15:8993804 Cone14ag0233 Cone-Chr14:1081526 1.76E-48 transposed
Cone14ag0233 Cone-Chr14:1081526 Cone15ag0251 Cone-Chr15:1176854 4.21E-285 wgd
Cone14ag0233 Cone-Chr14:1081526 Cone4ag0409 Cone-Chr4:1860772 7.62E-288 wgd
Cone14ag0233 Cone-Chr14:1081526 Cone7ag0397 Cone-Chr7:1772122 3.61E-286 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0233 K03231 - gmx:110008577 781.171