Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0277 ATGGCTGGATTAGACTTAGGCTCAGCTTCTCGCTTTGTCCAGCAACTCCAACAACGCCCCGACCTTCACCTTCAAAGACAGCCCGACCCCACTTCTGATGTCGACAGCCACAACCGCTTTGCGGCCAGGGCCGAGCGTGACGATCACGACAACATCCATCAAGGCCTTGACCTTGTTACCCATAACCATACAGGTTCAGGGGATATCACGAGCCGTCGGCCTAGAGGCCGACCGCCTGGCTCGAAGAACAAGGCCAAGCCACCTGTCATCATAACTCGTGAGCAGGCAAACACCCTACGAGCTCATATCTTGGAGGTTTCCACGGGATGTGATGTCTTTTCGTCGGTGGCTACTTATGCTCGGAAGCGTCAACGTGGGATCTGTATCTTGAGCGGAAGTGGGACTGTTACCAACGTGAGCTTACGCCAGCCGGCAGCGGCTGGAGCCGTCGTGACATTACATGGAAGGTTTGAGATACTCTCGTTATCAGGATCCTTTCTACCGCCACCGGCCCCGCCCGGTGCCACCAGTCTGACAATATTTTTGGCAGGAGGGCAAGGTCAAGTTGTGGGGGGTAATGTTGTGGGTGCTTTGATTGCATCAGGGCCAGTCATAGTCATAGCTTCGTCTTTTACAAATGTCGCGTATGAAAGGTTACCGCTAGATGAAGAGGAAGGCTTACAACAGGCAGTCTCACAGTCTTCTGGCGGCGGCGGTGATGGTAGTGATGGTGGTGGAAACGGCCCATTTAGACCTGATCCGTCGTCAGGTCTTCCGTTTTTTAATTTGCCGTTAAACATGCCGAGTCAAAATCAATTACCGGTTGATGGGTGGGCTGGAAATTCGGGAGGACAGCCTTCTTACTGA 867 53.29 MAGLDLGSASRFVQQLQQRPDLHLQRQPDPTSDVDSHNRFAARAERDDHDNIHQGLDLVTHNHTGSGDITSRRPRGRPPGSKNKAKPPVIITREQANTLRAHILEVSTGCDVFSSVATYARKRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFTNVAYERLPLDEEEGLQQAVSQSSGGGGDGSDGGGNGPFRPDPSSGLPFFNLPLNMPSQNQLPVDGWAGNSGGQPSY 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1262905 1263771 + Conep14aG0028200.1 Cone14ag0277 452126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0277 288 CDD DUF296 100 183 IPR005175 -
Cone14ag0277 288 MobiDBLite consensus disorder prediction 262 288 - -
Cone14ag0277 288 MobiDBLite consensus disorder prediction 57 88 - -
Cone14ag0277 288 FunFam AT-hook motif nuclear-localized protein 99 226 - -
Cone14ag0277 288 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 228 - -
Cone14ag0277 288 MobiDBLite consensus disorder prediction 225 288 - -
Cone14ag0277 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 212 IPR005175 -
Cone14ag0277 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 39 279 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone14ag0277 288 ProSiteProfiles PPC domain profile profile. 96 233 IPR005175 -
Cone14ag0277 288 Gene3D - 99 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0277 Cone-Chr14:1262905 Cone7ag0452 Cone-Chr7:2047086 5.58E-143 dispersed
Cone14ag0277 Cone-Chr14:1262905 Cone15ag0295 Cone-Chr15:1377333 1.12E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0277 - - - 0.0