Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0296 ATGGCGGCTATGATGGAAGAAGAGGGAACGAGGAAGGAGGTCGAGGTGGTGGTGAATGAAGAAGATGACGAACATGATGCAAAGGAGAGAGTGATACAGAAGTACTTCCTTCATGAATGGAAGCTCGTCAAGTCACTCCTCGACGACATCGTTTCAAATGGACGCGTTTCCGATGCCTCCGCCGTCCACAGGATCCGATCCATTGTACACAATGTTCTCTCTCTCAGAGTATGGACAAAGTATCAAGAACAAGGTCAGTTAGTAGAGCCTTACCCGGAGAGCATAGTTTCTCCTTTAATGCTTCTTGTCCTATTGAAGACAATTGAAGTTGGTGTAGTTTCAAATGAAATACTTGAAGTAATCAAGCCGATATGCATTATAATCTATACACTGATCACAGTTTGTGGATATAAGGCTGTGATCAAGTTCTTCCCACACCAGGTTTCTGATTTGGAACTTGCCGTGTCACTCTTGGAGAGATGCCATAACACGAATGCAGTGACATCACTTCACCAGGAAAGCACGGAAGAGATGGAGGCTAAGCGTGTGATACTTTTATGGCTTTCCATACTTGTTCTGGTTCTATTTGACATCTCTACTGTTGATACAAGTACTGCAAACAGTAATGATCTGGGAGAAAATGAGCCAACTCCTTTGGTATTGAGGATAATAGGGTTCTGTAAGGATTACCTTTCAACTGCAGGGCCAATGCACTCCATAGCTGGATTAATGCTCTCAAAGCTCTTAACTCGTCCAGATATGCCAAAGGCTGGTGATAGAAAACTCTTGCTTGATGTCGTTCCCAGTGTTTGGAATGACGCCTCTATGTTGATCAAGTCCAGCACAGCAGCTTGCAGTCCTTTACTCCGTAAAATCGAACCCGCTCCCTTGGACGGGATATTTCTCCTACTGCAGCCCCTGAAAGTCATCAACAAAATCATGGTCTTGATTTTGACTCCTCCAACCCAGGGAAAAGCTCAACCTGCTTGGAGGACGAAGATATGGGATGTTCATGAAATTGTTGAAGAGATTATTGAGATGGTACTTACTGGATTGAGAGATACGACAACAATAAGACAAGCTTTAGACCATGCCATTTATGCCCGAACCGAAGCACATGTTCTGGCCCCCAAGTGCAAAAGTGAGGGTGAAAAGGCTGCATTAGCTGATTGTCTTGAGCTATATGACCTCACCATCCTTAAACTCAATCACACCATATATACTAAATCAATCCAAGTAGAAGATGCACAAACATGGCTCAGCACCGCCCTCACAAACATGGACACTTGTCGAACCGGGTTTGTGGAGCTTGGAATTACCGACAGCATGATCTTGCCCATATTGTCGCTAGATAGCATTTCTGATTTAATTAGCAGCACTTTTGCTATTAACAAATTATCACCGTATAGTACTAATTCACGAGGGAATAACCATGTTGGGTTTCCAACTTGGGTCAAGCCTGGGGATCGGAAGCTCTTGCAATCTTCCGTTGATGCAAATCTTGTGGTGGCCCAAGATGGATCCGGGGATTGTGAGACGGTTATGGAGGCTATTTCTTCTGCTTCTGGGCGGTCCAGTGGGAGGTTTGTTATATATGTTAAGGCAGGGTTGTACAAAGAAAATGTTGCGATAAAGTCGAATAATATCATGTTGGTTGGTGATGGTATGGGGAAGACGATTCTAACGGGAAGTAGAAGTGTTGGTGGCGGTTCGACCACGTTTAATTCTGCCACTGTTGCTATTATTGGAGATGGATTTATAGCTCGAGACATAACCTTTAGAAACTCGGCTGGAGGATCGAGTCATCAAGCCGTGGCTCTCCTTTCACAATCCGATCATTCCGTGTTCTATAGGTGCAGTTTCGAAGGATACCAAGACACTCTCTATGTCCTTTCCAATAGACAATTTTACAAAGACTGCAACATTTACGGAAACCAAGATTTTATTTTCGGAAACGCGGCAGCCGTCTTTCAAAGTTGTAACATTTACGTACGTTACTGGCCCAACGACAAAACTAATATCATAACCGCTCAAGGTCGTACTAACCCTAATCAAAACACTGGGATTTCAATTCAAAACTGCCGAGTCACAGCTGCTTCCGACTTTCAATCTCACCAGGGTTCCGTTAAAACATATCTAGGGCGTCCCTGGAAGGAGTATTCTAGAACGGTTTTCATGAAGAGTTATCTCGATAGCTTGATTACTCCAGCCGGGTGGTCGGAATGGAGCGGTGGTTTCGCATTGAAGACATTGTATTATGGTGAGTACTCAAACACCGGTCCTGGCTCTGCCACTGGTAATAGAGTTAAGTGGCCAGGCTATCATGTTATGGATGGTTCCGAGGCTTCTAAATTCACCGTTAATAGCCTTATCAGCGGAAGTTCTTGGTTGCCCGCCACCAAAGTGCCCTTCACTGATGGGATTTGA 2427 44.42 MAAMMEEEGTRKEVEVVVNEEDDEHDAKERVIQKYFLHEWKLVKSLLDDIVSNGRVSDASAVHRIRSIVHNVLSLRVWTKYQEQGQLVEPYPESIVSPLMLLVLLKTIEVGVVSNEILEVIKPICIIIYTLITVCGYKAVIKFFPHQVSDLELAVSLLERCHNTNAVTSLHQESTEEMEAKRVILLWLSILVLVLFDISTVDTSTANSNDLGENEPTPLVLRIIGFCKDYLSTAGPMHSIAGLMLSKLLTRPDMPKAGDRKLLLDVVPSVWNDASMLIKSSTAACSPLLRKIEPAPLDGIFLLLQPLKVINKIMVLILTPPTQGKAQPAWRTKIWDVHEIVEEIIEMVLTGLRDTTTIRQALDHAIYARTEAHVLAPKCKSEGEKAALADCLELYDLTILKLNHTIYTKSIQVEDAQTWLSTALTNMDTCRTGFVELGITDSMILPILSLDSISDLISSTFAINKLSPYSTNSRGNNHVGFPTWVKPGDRKLLQSSVDANLVVAQDGSGDCETVMEAISSASGRSSGRFVIYVKAGLYKENVAIKSNNIMLVGDGMGKTILTGSRSVGGGSTTFNSATVAIIGDGFIARDITFRNSAGGSSHQAVALLSQSDHSVFYRCSFEGYQDTLYVLSNRQFYKDCNIYGNQDFIFGNAAAVFQSCNIYVRYWPNDKTNIITAQGRTNPNQNTGISIQNCRVTAASDFQSHQGSVKTYLGRPWKEYSRTVFMKSYLDSLITPAGWSEWSGGFALKTLYYGEYSNTGPGSATGNRVKWPGYHVMDGSEASKFTVNSLISGSSWLPATKVPFTDGI 808
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 1350625 1359510 - Conep14aG0030100.1 Cone14ag0296 452145
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0296 808 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 356 463 IPR035513 -
Cone14ag0296 808 Pfam Plant invertase/pectin methylesterase inhibitor 356 460 IPR006501 GO:0004857(InterPro)
Cone14ag0296 808 CDD PMEI-like_3 356 465 - -
Cone14ag0296 808 Gene3D Invertase/pectin methylesterase inhibitor family protein 352 466 IPR035513 -
Cone14ag0296 808 FunFam Pectinesterase 494 808 - -
Cone14ag0296 808 Pfam Pectinesterase 500 793 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone14ag0296 808 Gene3D - 494 808 IPR012334 -
Cone14ag0296 808 SUPERFAMILY Pectin lyase-like 497 806 IPR011050 -
Cone14ag0296 808 SMART PMEI_2 336 463 IPR006501 GO:0004857(InterPro)
Cone14ag0296 808 NCBIfam pectinesterase inhibitor domain 356 444 IPR006501 GO:0004857(InterPro)
Cone14ag0296 808 PANTHER PECTINESTERASE 357 799 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0296 Cone-Chr14:1350625 Cone4ag0485 Cone-Chr4:2163415 1.72E-206 dispersed
Cone15ag0322 Cone-Chr15:1480618 Cone14ag0296 Cone-Chr14:1350625 9.63E-152 transposed
Cone14ag0296 Cone-Chr14:1350625 Cone15ag0321 Cone-Chr15:1465626 2.72E-105 wgd
Cone14ag0296 Cone-Chr14:1350625 Cone4ag0484 Cone-Chr4:2157022 6.07E-207 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0296 K01051 - vvi:100255703 577.785