Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone14ag0306 | ATGGAAGCAGGAGAAGGAATGAATTCAGGGGTTAGAGTGATAGGAGCAGAAGCTCCATCAGCCTATCACATGGCTCCAAGAGCCGAGAACCCGAGCCAGGGTGCTGGTGGGCCCCCATCCATGATGACCTCACCTGTGATCGTTGGATCGGCAGAGAAAAAGAAGCGGGGTAGACCGAGAAAGTACGGACCTGATGGCTCTGTAACATTTTCTGCATCACCCGTTTCATCTACTGGATTATCATCATCTGGTGCTAAGCGAGGAAGGGGCAAGTCAAGTGATTTGGGTTATAAGCAGCCCAAGAAAATGGGAATGGATTATATAGGTGATCCAAATGGATGTTCTGTGGGTACAAGCTTTATGCCCCATATCATTTCCGTCAATGCTGGTGAGGATGTTACGGTGAAAGTGATATCGTTTTCTCAACAAGGACCTCGAGCCGTTTGCATCCTATCAGCTAGTGGCATGATTTCTAATGTTACAGTCCGTCAACATGATTCTTCTGGGGGGACTCTAACTTATGAGGGCCGTTTTGATATATTATCTTTGTCTGGCTCATTTGTGCCTGTGGAGAGCCAAGGATCAAGGAGCCGGTCTGGTAGCTTGAATGTCTCTCTTTCAAGCCCTGATGGTCGCGTTATAGGAGGCGTTGTAGCTGGACTACTCATTGCTGCTACTCCTGTCCAGGTTGTGGTGGGAAGCTTTCTACCAGGCACTGAGCCGGAGCACAAACCAAAGAAACTGAAGACAAAGTTTCCTCTGGCACGGCCCCCCACCTTACACACTTCCATGCCTGGTTCCGGCCCTGACCCCGATGATGGACCGGTTGGACATGGCCCGCAAAATTCAGGGGCTCAAAAGTCCTACTTTGCTACATCCTCTTCGTTCCGGAGGGAAAACTATACTACCATGCATTCCTTGGAGGACGCAAGAAACTCGGCTACTGACATCAATATATCTTTGCCTGGTGGGTTAAATTAG | 981 | 49.24 | MEAGEGMNSGVRVIGAEAPSAYHMAPRAENPSQGAGGPPSMMTSPVIVGSAEKKKRGRPRKYGPDGSVTFSASPVSSTGLSSSGAKRGRGKSSDLGYKQPKKMGMDYIGDPNGCSVGTSFMPHIISVNAGEDVTVKVISFSQQGPRAVCILSASGMISNVTVRQHDSSGGTLTYEGRFDILSLSGSFVPVESQGSRSRSGSLNVSLSSPDGRVIGGVVAGLLIAATPVQVVVGSFLPGTEPEHKPKKLKTKFPLARPPTLHTSMPGSGPDPDDGPVGHGPQNSGAQKSYFATSSSFRRENYTTMHSLEDARNSATDINISLPGGLN | 326 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 1406920 | 1410157 | - | Conep14aG0031200.1 | Cone14ag0306 | 452155 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone14ag0306 | 326 | MobiDBLite | consensus disorder prediction | 22 | 99 | - | - | |
| Cone14ag0306 | 326 | Gene3D | - | 122 | 252 | - | - | |
| Cone14ag0306 | 326 | MobiDBLite | consensus disorder prediction | 69 | 88 | - | - | |
| Cone14ag0306 | 326 | MobiDBLite | consensus disorder prediction | 237 | 295 | - | - | |
| Cone14ag0306 | 326 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 8 | 280 | IPR039605 | GO:0003680(InterPro) | |
| Cone14ag0306 | 326 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 119 | 239 | - | - | |
| Cone14ag0306 | 326 | CDD | DUF296 | 122 | 235 | IPR005175 | - | |
| Cone14ag0306 | 326 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
| Cone14ag0306 | 326 | ProSiteProfiles | PPC domain profile profile. | 117 | 258 | IPR005175 | - | |
| Cone14ag0306 | 326 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 122 | 235 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone14ag0306 | Cone-Chr14:1406920 | Cone8ag0357 | Cone-Chr8:2067946 | 1.26E-91 | dispersed | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone14ag0309 | Cone-Chr14:1438102 | 3.85E-19 | proximal | |
| Cone11ag0388 | Cone-Chr11:1912189 | Cone14ag0306 | Cone-Chr14:1406920 | 1.35E-18 | wgd | |
| Cone12ag0459 | Cone-Chr12:2872632 | Cone14ag0306 | Cone-Chr14:1406920 | 2.22E-20 | wgd | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone15ag0333 | Cone-Chr15:1527904 | 6.77E-207 | wgd | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone18ag1132 | Cone-Chr18:8173667 | 4.94E-18 | wgd | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone6ag0720 | Cone-Chr6:3625087 | 2.04E-88 | wgd | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone8ag0466 | Cone-Chr8:3052220 | 1.91E-19 | wgd | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone8ag0353 | Cone-Chr8:2019529 | 2.18E-19 | wgd | |
| Cone14ag0306 | Cone-Chr14:1406920 | Cone9ag0724 | Cone-Chr9:3455326 | 6.33E-90 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone14ag0306 | - | - | - | 0.0 |