Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone14ag0309 | ATGGACGGCCGATCCCTGCCCCCTCACTTCCTCTCCAAAGACCTCCACCTCCACCCTGGCCACCACCGATTCTTCCAACACCACCATCAACAACCACAAAACTCCGAAGAAAATGACCAGGGTCAACAACAACAAAACCGCCGCCAAAAAGGAGATAGAGAAGAAGAAGAAAACGGTCAAAACATGAACCTCATGATCAACAACACAACCGATCAATTAGCAGGCAGCACCACAAGTACTGGAGGAGGAGGAGATCGTGATCGTGACCATAATAATCAATCGGATGAAATCACAAGAAGGCCCAGAGGCAGGCCCGCTGGGTCAAAAAACAAGCCCAAACCACCCATCATCATAACCCGGGACAGCGCCAACGCTCTCCGGTCCCATGTCATGGAAATCGCAACCGGCTGTGACATCATCGAGAGTGTTACGGTTTTTGCTCGGAGAAAGCAAAGAGGAGTTTGTATTTTGAGCGGAAGCGGAACCGTCACCAACGTCACTCTAAAACAACCTGCTTCAGTAGGTGCAGTTGTCACTTTACATGGTAGATTCGAGATTTTATCGCTTTCTGGATCGTTTTTGCCCCCTCCAGCCCCACCAGCAGCTTCTGGATTGACTATATATTTGGCTGGTGGACAAGGGCAGGTGGTCGGAGGGAGTGTGGTGGGTCCGCTTTTGGCGTCTGGGCCAGTGGTTATTATGTCAGCTTCGTTTGGTAATGCAGCGTATGAGAGGTTGCCGCTAGTTGAGGACGATGATATTGCAGCGGGGGTTCCGGGAAGTACTACTGGGCCTATCGGGTCGCCCGGAGTTGTTGGATCGGGCCAACTACAGCAGCAGCAGCAACTCATGATGGATCATACCACATCACCTTTGTTTCATGGGGTGCCGCAAAATCTTCTAAATTCATGTCAATTGCCTAATGAGGGTCACTGGGGAGGAACAGGTCGTCCACCTTTTTAA | 963 | 50.88 | MDGRSLPPHFLSKDLHLHPGHHRFFQHHHQQPQNSEENDQGQQQQNRRQKGDREEEENGQNMNLMINNTTDQLAGSTTSTGGGGDRDRDHNNQSDEITRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEIATGCDIIESVTVFARRKQRGVCILSGSGTVTNVTLKQPASVGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGPLLASGPVVIMSASFGNAAYERLPLVEDDDIAAGVPGSTTGPIGSPGVVGSGQLQQQQQLMMDHTTSPLFHGVPQNLLNSCQLPNEGHWGGTGRPPF | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1438102 | 1439064 | + | Conep14aG0031500.1 | Cone14ag0309 | 452158 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone14ag0309 | 320 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 123 | 248 | - | - | |
Cone14ag0309 | 320 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 127 | 238 | IPR005175 | - | |
Cone14ag0309 | 320 | PIRSF | ESCAROLA | 16 | 319 | IPR014476 | GO:0003680(InterPro) | |
Cone14ag0309 | 320 | MobiDBLite | consensus disorder prediction | 83 | 103 | - | - | |
Cone14ag0309 | 320 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 56 | 319 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone14ag0309 | 320 | ProSiteProfiles | PPC domain profile profile. | 123 | 262 | IPR005175 | - | |
Cone14ag0309 | 320 | MobiDBLite | consensus disorder prediction | 60 | 82 | - | - | |
Cone14ag0309 | 320 | CDD | DUF296 | 127 | 194 | IPR005175 | - | |
Cone14ag0309 | 320 | FunFam | AT-hook motif nuclear-localized protein | 126 | 253 | - | - | |
Cone14ag0309 | 320 | Gene3D | - | 126 | 252 | - | - | |
Cone14ag0309 | 320 | MobiDBLite | consensus disorder prediction | 25 | 117 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0388 | Cone-Chr11:1912189 | Cone14ag0309 | Cone-Chr14:1438102 | 2.28E-99 | dispersed | |
Cone14ag0309 | Cone-Chr14:1438102 | Cone15ag0335 | Cone-Chr15:1556311 | 1.26E-160 | dispersed | |
Cone14ag0306 | Cone-Chr14:1406920 | Cone14ag0309 | Cone-Chr14:1438102 | 3.85E-19 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone14ag0309 | - | - | - | 0.0 |