Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0318 ATGGCGAATCTTCAGAGACGAGAACTCGAAAAGGACGAAGAGACGCGGGCCGTTGACGTGAGAACAAACGGCCGAGATGAGAACCTGCTTATAACCGGGTCCGGGAAGGATAAGGATCCGGGGCCGAGCAAAGCTCTAGCTTTAGCTCCGAAAGAAGAAGTGGAAGACCCGATTACGGAAATTCAGGTCGTACAGTCTGCAGTTGCTCAGCCGGCGAAGAGAGCTTCGACTAAGGACCGCCATACGAAAGTGGAGGGTCGTGGTCGGAGGATCCGAATGCCCGCTACTTGTGCCGCTCGTATTTTCCAGCTGACACGGGAACTCGGCCACAAGTCCGACGGAGAAACTATCAGATGGCTCCTCGAGCACTCTGAGCCGGCGATCATAGCAGCCACCGGTACCGGAACCATTCCCGCCATAGCCATGTCTGTTAACGGAACTCTTACAATCCCTACTACGCGACCGTCCGACCCGGAAACTAGCGACCCGTCAACCAATAAGAAGCGGAAAAAACCTGTCAACGGTGATTACGGGGACGTAAGCGATGCCGTTACGATCTCTGTCCCAAACGGTTTATCTCTCACCACTACTACTACCACTACCACCACACAGCAACAAGGTTTACCACAGGGTTTAGTTCCTATGTGGGCCATTCCTTCAAACGCCGTCGTTCCAGGCGCGTTCTTCATGTTCCCGCCGGTAGCTTCCATAGCCGGATCTTCAACTCAACCGCAGATATTTACATTTCCGGCGGCTTCTACTCCTCTTGTTAACATTTCGGCGAGACCTATTTCGTCTTTCATGTCATACCTACCTAATAACTCGACTACGATAAATTCCGCCTCGATTTCCAATTCAAGTAAGGCTACCTCGACGTCGTCTAAAGCTGATCAATCAGTCATGGCGCCGATTTCTTCTAGCTCCTGTAATACGAAGACGACCACGACGACAACGCCTCAGCTGCTTAGAGATTTTTCTTTAGAGATTTACGATAGACAAGAGCTTCAGTTCATGTCTCGCAAGCTGGAAGGTGGGGCCAACCATTGTTCTTCCCCTTTTTTCGAAGTGGGAGCACGTGGCAACGTCAACAACACGAGGGTGGTGGTGCTCCGTGGACCGTTCAAGGGTCACACTTAA 1137 51.72 MANLQRRELEKDEETRAVDVRTNGRDENLLITGSGKDKDPGPSKALALAPKEEVEDPITEIQVVQSAVAQPAKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHSEPAIIAATGTGTIPAIAMSVNGTLTIPTTRPSDPETSDPSTNKKRKKPVNGDYGDVSDAVTISVPNGLSLTTTTTTTTTQQQGLPQGLVPMWAIPSNAVVPGAFFMFPPVASIAGSSTQPQIFTFPAASTPLVNISARPISSFMSYLPNNSTTINSASISNSSKATSTSSKADQSVMAPISSSSCNTKTTTTTTPQLLRDFSLEIYDRQELQFMSRKLEGGANHCSSPFFEVGARGNVNNTRVVVLRGPFKGHT 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1501325 1502656 - Conep14aG0032400.1 Cone14ag0318 452167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0318 378 MobiDBLite consensus disorder prediction 281 315 - -
Cone14ag0318 378 MobiDBLite consensus disorder prediction 148 180 - -
Cone14ag0318 378 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 71 284 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cone14ag0318 378 MobiDBLite consensus disorder prediction 1 50 - -
Cone14ag0318 378 MobiDBLite consensus disorder prediction 1 23 - -
Cone14ag0318 378 Pfam TCP family transcription factor 76 164 IPR017887 -
Cone14ag0318 378 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Cone14ag0318 378 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0038 Cone-Chr11:200499 Cone14ag0318 Cone-Chr14:1501325 2.48E-32 dispersed
Cone14ag0318 Cone-Chr14:1501325 Cone18ag1441 Cone-Chr18:9703268 3.98E-33 dispersed
Cone14ag0318 Cone-Chr14:1501325 Cone15ag0348 Cone-Chr15:1623578 8.78E-166 wgd
Cone14ag0318 Cone-Chr14:1501325 Cone6ag0740 Cone-Chr6:3733009 3.54E-65 wgd
Cone14ag0318 Cone-Chr14:1501325 Cone9ag0744 Cone-Chr9:3534491 1.66E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44715 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0318 - - - 0.0