Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone14ag0373 | ATGGGTTTTCCAGTCGGCTACACAGAAGTTTTTTTCCCCAATGCCTTTCTCCACGTACTCACACTTCTTGGTCTAATCCGGAATCTGATTCTGTCCCTCTTTAGATTCCTCGGCCTGTCGGAATTCTTCGAAACGACAGTCGTTTGGCCCGAAATGCACACACGATTACCCGACAGCCCGCCGGTATCCGCTCTCCTGATCAGGGAACTGCTGCCGGTGGTGAAATTATCTGACGTCATGTCGGTCGACCAGCCGGAAAGCTGCCCGGTTTGTCTGTACGAGTTTGAAGGCGGGGAGGAGATCAGGTGGTTGGCCAACTGTAAGCACATTTTCCACAGTGCTTGTTTGGACCGTTGGATGGATCATGATCAGAAGACGTGTCCGCTTTGTAGGACCCCCTTCGTGCCTGATGAGATGCAGGATGGGTTTAATCAACGGCTCTGGGCTGCCTCTGGTGTGTCTGATTCTTACAGTGAGTACAGTTCGGTTTGA | 492 | 51.83 | MGFPVGYTEVFFPNAFLHVLTLLGLIRNLILSLFRFLGLSEFFETTVVWPEMHTRLPDSPPVSALLIRELLPVVKLSDVMSVDQPESCPVCLYEFEGGEEIRWLANCKHIFHSACLDRWMDHDQKTCPLCRTPFVPDEMQDGFNQRLWAASGVSDSYSEYSSV | 163 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 1746923 | 1747507 | - | Conep14aG0038100.1 | Cone14ag0373 | 452222 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone14ag0373 | 163 | SMART | ring_2 | 88 | 130 | IPR001841 | - | |
| Cone14ag0373 | 163 | Pfam | Ring finger domain | 87 | 131 | IPR001841 | - | |
| Cone14ag0373 | 163 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 139 | IPR013083 | - | |
| Cone14ag0373 | 163 | SUPERFAMILY | RING/U-box | 75 | 137 | - | - | |
| Cone14ag0373 | 163 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 131 | IPR001841 | - | |
| Cone14ag0373 | 163 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 11 | 142 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0875 | Cone-Chr13:7783740 | Cone14ag0373 | Cone-Chr14:1746923 | 1.04E-14 | dispersed | |
| Cone14ag0373 | Cone-Chr14:1746923 | Cone3ag1272 | Cone-Chr3:31560196 | 1.84E-15 | dispersed | |
| Cone11ag0437 | Cone-Chr11:2199346 | Cone14ag0373 | Cone-Chr14:1746923 | 6.90E-71 | wgd | |
| Cone14ag0373 | Cone-Chr14:1746923 | Cone15ag0411 | Cone-Chr15:1932700 | 2.24E-109 | wgd | |
| Cone14ag0373 | Cone-Chr14:1746923 | Cone18ag1070 | Cone-Chr18:7865316 | 6.29E-73 | wgd | |
| Cone14ag0373 | Cone-Chr14:1746923 | Cone6ag0797 | Cone-Chr6:4050799 | 5.61E-64 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone14ag0373 | K16281 | - | cit:127900876 | 237.269 |