Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0379 ATGTCTGTATACGATGCGTCGTTTGTAAACACGGAGCTATCAAAACCGACGTCAATCTTCGGGCTACGTCTCTGGGTCGTGATCGGAATCCTACTCGGAGCACTAATCGTACTCCTCCTCTTCCTCTTCTCTCTCTGCCTCACTTCTCGCCGAAACCGGAACCAAACCCATCTGCCCAAACAGCAGAAATCCTCTTCCACCCCACTTGTCGTTTCAAAGGAGATCCAGGAAATCGTACACCTCGCCGCACCAGATCACCACCACACTCAGCCGGAAATTCAGGTGGAGATAGGGAAATTGGAGCATAGGGTTGTCTTCTTCGACCGGCCGTCGAGTGGAGAGAGCAGAGGTGGTTTGAGCGATACGGTGTCGGTGGGATCGGTCGGTGTGGGGCCCGAGGTATCGCATCTGGGTTGGGGAAGATGGTATACTTTGAGAGAGCTTGAAGAAGCTACGAATGGATTGTGTGAAGAGAATGTAATTGGAGAAGGTGGTTATGGGATTGTTTATCATGGCGTTTTAGGTGATGGTACTAAAATTGCAGTGAAGAATCTCTTGAACAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTAGAAGTGGAAGTAATTGGGCGAGTTAGACACAAGAATCTGGTGAGGCTGCTTGGATACTGTGTAGAGGGTGCTTACAGGATGCTTGTCTATGAGTATGTTGACAACGGCAATCTCGATCAATGGCTTCATGGTGATGTTGGTGATGTCAGCCCTCTAACATGGAATATTCGCATCAACATTATCTTTGGAACAGCCAAGGGATTAGCCTATCTTCATGAAGGTCTCGAGCCAAAGGTTGTCCACAGAGATGTAAAATCCAGCAACATACTACTTGATCGCCAATGGAATGCTAAGGTATCAGATTTCGGTCTCGCTAAGCTTCTTTGCTCTGAGAGAAGTTATGTAACTACTCGTGTCATGGGGACATTCGGATATGTTGCACCGGAATATGCTTGCACTGGAATGTTAACTGAGAAGAGTGATGTTTATAGCTTTGGAATACTTCTTATGGAGTTGATTTCTGGAAGAAGCCCTGTTGATTACAGTCGGCCCAAAGGAGAGGTCAATCTGGTGGAGTGGTTAAAAACTATGGTTGGGAACCGAAAATCGGAGGAAGTGGTCGATCCGAAAATGCCTGAGATGCCTTCTTCAAAAGCACTTAAACGGATTTTGCTCGTTGCTCTTCGATGTGTGGACCCGGATGCAACGAAGAGGCCAAAAATGGGACATGTCATCCACATGCTTGAGGCCGATGACTTGTTATATCATGAAAACCGGATTGGTCAAGATTCATGTTCTCATTCGGGTCGTGATATTCATCAACAAGAGAATCATGCTGTCGGGAAAGTGAGTGATAAGGAAAAAGGGGAAGGGGCCTCGAGATGGCGATAA 1425 46.95 MSVYDASFVNTELSKPTSIFGLRLWVVIGILLGALIVLLLFLFSLCLTSRRNRNQTHLPKQQKSSSTPLVVSKEIQEIVHLAAPDHHHTQPEIQVEIGKLEHRVVFFDRPSSGESRGGLSDTVSVGSVGVGPEVSHLGWGRWYTLRELEEATNGLCEENVIGEGGYGIVYHGVLGDGTKIAVKNLLNNRGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVGDVSPLTWNIRINIIFGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILLMELISGRSPVDYSRPKGEVNLVEWLKTMVGNRKSEEVVDPKMPEMPSSKALKRILLVALRCVDPDATKRPKMGHVIHMLEADDLLYHENRIGQDSCSHSGRDIHQQENHAVGKVSDKEKGEGASRWR 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1772637 1776150 - Conep14aG0038700.1 Cone14ag0379 452228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0379 474 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524(InterPro)
Cone14ag0379 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0379 474 SMART serkin_6 155 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0379 474 MobiDBLite consensus disorder prediction 442 474 - -
Cone14ag0379 474 FunFam Putative receptor-like serine/threonine-protein kinase 231 440 - -
Cone14ag0379 474 FunFam Probable serine/threonine-protein kinase At1g01540 135 230 - -
Cone14ag0379 474 ProSiteProfiles Protein kinase domain profile. 155 432 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0379 474 Gene3D Phosphorylase Kinase; domain 1 131 230 - -
Cone14ag0379 474 SUPERFAMILY Protein kinase-like (PK-like) 133 427 IPR011009 -
Cone14ag0379 474 CDD STKc_IRAK 161 427 - -
Cone14ag0379 474 PANTHER OS01G0323000 PROTEIN 7 454 IPR052232 -
Cone14ag0379 474 Gene3D Transferase(Phosphotransferase) domain 1 231 441 - -
Cone14ag0379 474 Pfam Protein tyrosine and serine/threonine kinase 158 425 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0379 Cone-Chr14:1772637 Cone7ag1363 Cone-Chr7:9883587 3.61E-211 dispersed
Cone5ag0826 Cone-Chr5:3543043 Cone14ag0379 Cone-Chr14:1772637 1.18E-78 dispersed
Cone7ag1511 Cone-Chr7:10526707 Cone14ag0379 Cone-Chr14:1772637 3.13E-11 dispersed
Cone1ag0947 Cone-Chr1:54753152 Cone14ag0379 Cone-Chr14:1772637 1.22E-54 wgd
Cone14ag0057 Cone-Chr14:335657 Cone14ag0379 Cone-Chr14:1772637 3.84E-109 wgd
Cone14ag0379 Cone-Chr14:1772637 Cone15ag0416 Cone-Chr15:1952683 2.62e-316 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82079 PF13419 HAD_2 8.70E-29 CL0137 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0379 - - - 0.0