Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0387 ATGGAAGATGATTGGGATCTCCACGCGGTGGTCAGAGGCTGCTTCGCCGCCGCCACCTCCTGCACCTCCTCCCCCCCTCTTACACCACCTCTTATTACTGACCTTGCTTCTAACTCTACCACCCCCTTCTTTTCCCCTTCTTACACCGACCACTTTTGTACCCAATTTCTCTCCCTCCCAGATCATTTCGAAGACTTGCATGAGCTGTTGATCAACCCTCTCCGCCACAAACCTTCCCCTCAACCGCCGCAGACTCCGCCGTTGATTTCTCTACCGAGCACCACCGCATCCATCCCCTTTCTAACTCTAGATCAACAAAAACAACGGCCTAGTAATAACACCAAGCATTCTCATGGCGGCTCTTTACTCACCACCCCACGATCCAAAAAAAAGAAGAACCAGATGAAGAAGGTTTGCCAAGTAGCAGCAGAGTCTCTCTCTTCAGACATTTGGGCCTGGCGAAAATACGGCCAAAAGCCTATTAAAGGTTCTCCTTATCCTAGGGGATATTATAGATGTAGTAGCTCAAAAGGATGTATGGCCCGGAAACAAGTGGAGCGGAACAGATCCGACCCGAATATGTTCATAGTCACGTACACGGCGGAGCACAACCACCCTGCTCCGACGCACCGGAATTCTCTGGCGGGGTCCACGCGTCAGAAGCCATCGTCGCCACCAGCTGTCGTGGCCAGCGAAGGAAACGAATCACAGACGAAGCAATCTGCTTGCTCTTCCTCGGCGTCTATGGAGGAAGAAACGATGGAAAGCAAGGAGACGGAGGTGGAAGAAGATGGGTTCGTGATATCGGATATGGTGGTGAGTGAGGATTTCTTTTGGGGTTTACAGGAACCTGACGGACCTGGAACCATCGGAGACTACTTTCCCGATCAGTATCCGGCGGATTTCGGGATTCCTTGGGTTGTTAATAGTAGTGCTGCCACTGCCGCCAGTAGTAGCTAA 960 51.77 MEDDWDLHAVVRGCFAAATSCTSSPPLTPPLITDLASNSTTPFFSPSYTDHFCTQFLSLPDHFEDLHELLINPLRHKPSPQPPQTPPLISLPSTTASIPFLTLDQQKQRPSNNTKHSHGGSLLTTPRSKKKKNQMKKVCQVAAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPNMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSSPPAVVASEGNESQTKQSACSSSASMEEETMESKETEVEEDGFVISDMVVSEDFFWGLQEPDGPGTIGDYFPDQYPADFGIPWVVNSSAATAASSS 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1810039 1811441 + Conep14aG0039500.1 Cone14ag0387 452236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0387 319 MobiDBLite consensus disorder prediction 106 136 - -
Cone14ag0387 319 MobiDBLite consensus disorder prediction 205 250 - -
Cone14ag0387 319 Gene3D WRKY domain 131 201 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0387 319 Pfam WRKY DNA -binding domain 149 206 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0387 319 MobiDBLite consensus disorder prediction 106 128 - -
Cone14ag0387 319 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 262 IPR044810 GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone14ag0387 319 MobiDBLite consensus disorder prediction 202 261 - -
Cone14ag0387 319 FunFam WRKY transcription factor 22 130 201 - -
Cone14ag0387 319 ProSiteProfiles WRKY domain profile. 142 208 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0387 319 SUPERFAMILY WRKY DNA-binding domain 144 208 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0387 319 SMART WRKY_cls 147 207 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0387 Cone-Chr14:1810039 Cone15ag0055 Cone-Chr15:335860 4.00E-45 dispersed
Cone14ag0387 Cone-Chr14:1810039 Cone14ag0389 Cone-Chr14:1820231 3.97E-15 proximal
Cone11ag0447 Cone-Chr11:2253478 Cone14ag0387 Cone-Chr14:1810039 7.63E-61 wgd
Cone14ag0050 Cone-Chr14:312009 Cone14ag0387 Cone-Chr14:1810039 1.61E-49 wgd
Cone14ag0387 Cone-Chr14:1810039 Cone15ag0424 Cone-Chr15:2001244 1.13E-170 wgd
Cone14ag0387 Cone-Chr14:1810039 Cone18ag1061 Cone-Chr18:7777622 3.15E-61 wgd
Cone14ag0387 Cone-Chr14:1810039 Cone6ag0812 Cone-Chr6:4127490 7.43E-43 wgd
Cone14ag0387 Cone-Chr14:1810039 Cone9ag0811 Cone-Chr9:3902804 2.97E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44723 PF01040 UbiA 5.20E-34 CL0613 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0387 K13425 - vvi:100256849 263.848