Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0389 ATGGATATACGAGGCCAAGAAATCACGAACCCTAATTGTAATGATAGCTATCTCTTCGCCCGGCCAGCTGCTCTTCCATCTTCTTCTACGACTACCTCATTTGATCATGATCATGATGATAACATTGACTGGGTCTGCAGCCTTCTCTCGAGCCCACCACCTACAGCTTCAAGTGGGCCAATTAGTGATGATCAGAGCATGGTCATGATCCAGCCCATCACGGAAACTAACGATGATCCGACATCATTTTCGTCAGCAGCTATGGCTGATGATCGAAATGAAAACGATAAAGATGATCATAAGGATAATGATGATAATATGATGATGAAGAAGATGAAGAAGAAGAAGTTTGATAGTAGTAGAATAATGATGAAGAGAAAGGCGAACCATCCTAGGGTTGCTTTTCAGACAAGGAGTGCCGAGGATGTTCTTGATGATGGCTATCGATGGCGTAAATACGGTCAAAAATCTGTCAAGAACAGCCCTTTTCCCAGGAGCTACTATCGTTGTACGCAACACACATGCAACGTGAAGAAACAAGTGCAGAGGCTATCGAAGGATACGAGCATCGTAGTGACAACGTACGAAGGAGTTCATAATCATCCCTCTGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCCGACAAATGCAATTCCTCGCTACCTTCTAA 672 43.9 MDIRGQEITNPNCNDSYLFARPAALPSSSTTTSFDHDHDDNIDWVCSLLSSPPPTASSGPISDDQSMVMIQPITETNDDPTSFSSAAMADDRNENDKDDHKDNDDNMMMKKMKKKKFDSSRIMMKRKANHPRVAFQTRSAEDVLDDGYRWRKYGQKSVKNSPFPRSYYRCTQHTCNVKKQVQRLSKDTSIVVTTYEGVHNHPSEKLMETLTPLLRQMQFLATF 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1820231 1821171 + Conep14aG0039700.1 Cone14ag0389 452238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0389 223 MobiDBLite consensus disorder prediction 90 108 - -
Cone14ag0389 223 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0389 223 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 202 IPR044810 GO:0003700(InterPro)
Cone14ag0389 223 MobiDBLite consensus disorder prediction 75 89 - -
Cone14ag0389 223 Pfam WRKY DNA -binding domain 145 202 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0389 223 FunFam WRKY transcription factor 57 130 204 - -
Cone14ag0389 223 SUPERFAMILY WRKY DNA-binding domain 137 203 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0389 223 SMART WRKY_cls 144 203 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0389 223 Gene3D WRKY domain 128 203 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0389 223 MobiDBLite consensus disorder prediction 75 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0389 Cone-Chr14:1820231 Cone15ag0427 Cone-Chr15:2010547 1.32E-104 dispersed
Cone14ag0387 Cone-Chr14:1810039 Cone14ag0389 Cone-Chr14:1820231 3.97E-15 proximal
Cone14ag0389 Cone-Chr14:1820231 Cone6ag0813 Cone-Chr6:4129505 3.61E-53 wgd
Cone14ag0389 Cone-Chr14:1820231 Cone9ag0812 Cone-Chr9:3904808 9.08E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44724 PF14572 Pribosyl_synth 1.30E-22 CL0533 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0389 - - - 0.0