Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0449 ATGGCGTCGGATCATAAAGTGTATACCTTTGATGAAGTCTCAAAGCACAACCATAAGAAAGATATCTGGATTATAATTTCTGGGAAGGTTTATGATGTCACCCCATTTCTAGAGGAACACCCCGGAGGCGATGAAGTATTGCTGCTAGCAGCTGAGAAAGATGCAACAGATGATTTTAACGATGTGGGCCATAGCGATAATGCGCAAGAACTGATGGAGAAATACTACGTGGGGAAAGTGGATAAATCTACCCTTCCGGCTCGGCCAGATTACCGGCCACCCAATCCAACACCTCAACCCGACCAATCTTCAGGGTTTCTGGTCAAGATCTTGCAGTTTCTGCTTCCTTTGGTGATCTTAGGCCTTGCTTATGGGCTTCAATATTTTCGCAAAAAGGAGTGA 402 45.02 MASDHKVYTFDEVSKHNHKKDIWIIISGKVYDVTPFLEEHPGGDEVLLLAAEKDATDDFNDVGHSDNAQELMEKYYVGKVDKSTLPARPDYRPPNPTPQPDQSSGFLVKILQFLLPLVILGLAYGLQYFRKKE 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2102538 2104490 + Conep14aG0045900.1 Cone14ag0449 452298

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0449 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cone14ag0449 133 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cone14ag0449 133 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cone14ag0449 133 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cone14ag0449 133 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cone14ag0449 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 92 IPR036400 -
Cone14ag0449 133 PANTHER CYTOCHROME B5 4 126 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cone14ag0449 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cone14ag0449 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cone14ag0449 133 SMART Cyt_b5_2 8 81 IPR001199 -
Cone14ag0449 133 FunFam Cytochrome b5 type B 2 85 - -
Cone14ag0449 133 Gene3D - 1 86 IPR036400 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0449 K23490 - - mdm:103424638 209.92
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0449 Cone-Chr14:2102538 Cone18ag0994 Cone-Chr18:7305465 7.82E-63 dispersed
Cone1ag1008 Cone-Chr1:55070293 Cone14ag0449 Cone-Chr14:2102538 5.84E-54 wgd
Cone14ag0449 Cone-Chr14:2102538 Cone15ag0479 Cone-Chr15:2260879 4.26E-80 wgd
Cone14ag0449 Cone-Chr14:2102538 Cone5ag0716 Cone-Chr5:3082824 9.62E-38 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cone1ag1008 . 1 134 NADPH P450 reductases AT5G53560 73.1 1.1e-54 209.9
Cone5ag0716 . 1 168 NADPH P450 reductases AT5G53560 58.3 2.4e-49 192.2
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.1e-46 183.3
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.9e-46 182.6
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G53560 56.7 1.4e-41 166.4
Cone15ag0479 . 1 133 NADPH P450 reductases AT5G53560 52.2 1.6e-37 152.9
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G48810 65.2 7.4e-49 190.7
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G48810 65.2 1.3e-48 189.9
Cone1ag1008 . 1 135 NADPH P450 reductases AT5G48810 62.0 5.0e-45 177.9
Cone18ag0994 . 1 135 NADPH P450 reductases AT5G48810 55.9 6.3e-40 161.0
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G48810 53.7 2.4e-39 159.1
Cone7ag0386 . 22 133 NADPH P450 reductases AT2G32720 80.4 1.6e-48 189.5
Cone4ag0397 . 22 133 NADPH P450 reductases AT2G32720 79.5 4.6e-48 188.0
Cone1ag1008 . 22 133 NADPH P450 reductases AT2G32720 63.4 2.8e-37 152.1
Cone4ag0958 . 1 117 NADPH P450 reductases AT1G60660 60.0 4.3e-37 151.4
Cone9ag0531 . 1 130 NADPH P450 reductases AT1G26340 59.7 5.5e-41 164.5
Cone3ag0519 . 2 281 NADPH P450 reductases AT5G17770 80.4 9.1e-131 463.8
Cone10ag0494 . 3 281 NADPH P450 reductases AT5G17770 81.0 2.2e-129 459.1
Cone5ag1478 . 8 278 NADPH P450 reductases AT5G17770 76.4 8.2e-124 440.7
Cone1ag0382 . 8 278 NADPH P450 reductases AT5G17770 77.1 5.3e-123 438.0
Cone1ag1008 . 1 134 NADPH P450 reductases AT5G53560 73.1 1.1e-54 209.9
Cone5ag0716 . 1 168 NADPH P450 reductases AT5G53560 58.3 2.4e-49 192.2
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.1e-46 183.3
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G53560 64.7 1.9e-46 182.6
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G53560 56.7 1.4e-41 166.4
Cone15ag0479 . 1 133 NADPH P450 reductases AT5G53560 52.2 1.6e-37 152.9
Cone4ag0397 . 1 133 NADPH P450 reductases AT5G48810 65.2 7.4e-49 190.7
Cone7ag0386 . 1 133 NADPH P450 reductases AT5G48810 65.2 1.3e-48 189.9
Cone1ag1008 . 1 135 NADPH P450 reductases AT5G48810 62.0 5.0e-45 177.9
Cone18ag0994 . 1 135 NADPH P450 reductases AT5G48810 55.9 6.3e-40 161.0
Cone14ag0449 . 1 133 NADPH P450 reductases AT5G48810 53.7 2.4e-39 159.1
Cone7ag0386 . 22 133 NADPH P450 reductases AT2G32720 80.4 1.6e-48 189.5
Cone4ag0397 . 22 133 NADPH P450 reductases AT2G32720 79.5 4.6e-48 188.0
Cone1ag1008 . 22 133 NADPH P450 reductases AT2G32720 63.4 2.8e-37 152.1
Cone4ag0958 . 1 117 NADPH P450 reductases AT1G60660 60.0 4.3e-37 151.4
Cone9ag0531 . 1 130 NADPH P450 reductases AT1G26340 59.7 5.5e-41 164.5
Cone3ag0519 . 2 281 NADPH P450 reductases AT5G17770 80.4 9.1e-131 463.8
Cone10ag0494 . 3 281 NADPH P450 reductases AT5G17770 81.0 2.2e-129 459.1
Cone5ag1478 . 8 278 NADPH P450 reductases AT5G17770 76.4 8.2e-124 440.7
Cone1ag0382 . 8 278 NADPH P450 reductases AT5G17770 77.1 5.3e-123 438.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156