Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone14ag0450 | ATGACCACCATGCTTATCACCAACCCAGAAAGCCTCTGGATTTTCGCTCTCGCTTCCAAATGTAGAGCTCTCTCACACCACCACGTGCCATGCCTTCTCCTGATCATCACCCTTATCGGGCTTCTCTTCACCTTGCTTCACTGGGCGCACCCGGGCGGCCCAGCTTGGGGCAAGCACTACTTATGTCGCTCATACTGGACAAGACATAGTCCAAATGCAATGATCATTCCTGGCCCAAGAGGGTTGCCTCTAATAGGCAGCATGAGCCTCATGGCCCACTTGGCTCACCGCCGAATTGCAGCCATGGCTGAAGCTTGTGCGGCTAAGCGGCTCATGGCCTTCAGCCTCGGAAACACTCGAGTCATCGTCACCTGCAATCCTGACGTCGCGAAAGAAATCTTGAACAGCTCGGTTTTCGTTGATCGGCCCGTCAAGGAATCAGCTTACCGCTTGATGTTTAACAGGGCTATTGGCTTCGCTCCTTACGGGGTTTACTGGCGGACGCTACGTCGGATCGCTACTAACCATCTTTTCTGTCCCAAGCAGATTAAGGCGTCTGAGACGCAGAGACGACAGGTCGTTTCGCAGATGGTTAAAATCTTCGGCAGTTACGGTGAGTGCAATTCCTCTGTTCGTGAAGTAATAAAACGAGCTTCGTTGAGCAATATGATGTGCTCCGTTTTCGGTCGGGTCTACCCGTTGGATTCGGGTCGTTATAATGATGACGTAGACGAATTGAAGAAGCTCGTTGACGAAGGATATGATTTATTAGGCTTATTGAATTGGTCTGATCATCTTCACTTCTTATCTGACTTTGATGCTCAGAAAATCCGGTTCAGGTGCTCTCAGCTTGTGCCCAAAGTGAACCGATTCGTTTCCCGAATTATCGCCGAGAAACTAGAGAAATCCGGGAAAGAAGCGCGAGATTTTGTCGACGTCTTATTGACTTTACAAGGACCCGAGAAATTATCCGACTCCGATATGATCGCCGTTCTTTGGGAAATGATTTTTCGTGGAACAGATACGGTGGCGGTTTCAATCGAGTGGATACTAGCGAGGATGGTGATTCATCAGGAGGTTCAATCAACGGTCCATGATGAGCTGGACAAAATCGTCGGAAGATCAAGGGCAGTTGCTGAGTCTGACATTTCCTCGTTAGTGTATCTAACGGCTGTGATTAAGGAGGTCCTGAGGTTACATCCACCAGGCCCACTTTTATCATGGGCCCGACTAGCCATAACTGATACGACAATTGATGGGTATCATGTGCCCCAAGGGACCACAGCGATGGTCAATATGTGGTCAATTGCGCGGGACCCACAAGTATGGGCGGACCCACTGGAATTTATGCCCCATCGATTTGTAGCCCAAGAAGGTGAAGCGGAGTTTTCTATTATGGGCTCAGATCTCAGGCTCGCACCGTTCGGGTCGGGTAGACGGACCTGCCCGGGTAAGAACCTGGGTCTAACCACCGTGACCTTTTGGGTGTCTTCGCTGTTGCATGATTTTGAATGGTTACCGTCAGATCAGACGGCGGTTGATCTGTCAGAGGTTCTTAAACTATCGTGTGAGATGGCCCATCCTTTGACCGTTAGAGTACGCCAGAGGCGTAGCATAAGCTCCTCTACATGTTAG | 1635 | 50.03 | MTTMLITNPESLWIFALASKCRALSHHHVPCLLLIITLIGLLFTLLHWAHPGGPAWGKHYLCRSYWTRHSPNAMIIPGPRGLPLIGSMSLMAHLAHRRIAAMAEACAAKRLMAFSLGNTRVIVTCNPDVAKEILNSSVFVDRPVKESAYRLMFNRAIGFAPYGVYWRTLRRIATNHLFCPKQIKASETQRRQVVSQMVKIFGSYGECNSSVREVIKRASLSNMMCSVFGRVYPLDSGRYNDDVDELKKLVDEGYDLLGLLNWSDHLHFLSDFDAQKIRFRCSQLVPKVNRFVSRIIAEKLEKSGKEARDFVDVLLTLQGPEKLSDSDMIAVLWEMIFRGTDTVAVSIEWILARMVIHQEVQSTVHDELDKIVGRSRAVAESDISSLVYLTAVIKEVLRLHPPGPLLSWARLAITDTTIDGYHVPQGTTAMVNMWSIARDPQVWADPLEFMPHRFVAQEGEAEFSIMGSDLRLAPFGSGRRTCPGKNLGLTTVTFWVSSLLHDFEWLPSDQTAVDLSEVLKLSCEMAHPLTVRVRQRRSISSSTC | 544 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 2111433 | 2113293 | - | Conep14aG0046000.1 | Cone14ag0450 | 452299 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone14ag0450 | 544 | PANTHER | CYTOCHROME P450 78A7-RELATED | 3 | 532 | IPR051996 | - | |
| Cone14ag0450 | 544 | CDD | CYP78 | 109 | 529 | - | - | |
| Cone14ag0450 | 544 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 475 | 484 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone14ag0450 | 544 | SUPERFAMILY | Cytochrome P450 | 76 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | Pfam | Cytochrome P450 | 77 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | P450 superfamily signature | 338 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | P450 superfamily signature | 482 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | FunFam | Cytochrome P450 78A5 | 68 | 536 | - | - | |
| Cone14ag0450 | 544 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | E-class P450 group I signature | 327 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | E-class P450 group I signature | 390 | 408 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | PRINTS | E-class P450 group I signature | 347 | 373 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone14ag0450 | 544 | Gene3D | Cytochrome P450 | 62 | 542 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone14ag0450 | Cone-Chr14:2111433 | Cone16ag0218 | Cone-Chr16:1516225 | 6.28E-163 | dispersed | |
| Cone11ag0515 | Cone-Chr11:2677425 | Cone14ag0450 | Cone-Chr14:2111433 | 8.00E-275 | wgd | |
| Cone14ag0450 | Cone-Chr14:2111433 | Cone15ag0480 | Cone-Chr15:2267032 | 0 | wgd | |
| Cone14ag0450 | Cone-Chr14:2111433 | Cone18ag0995 | Cone-Chr18:7308166 | 2.63E-280 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone14ag0450 | K20619 | - | mdm:103406216 | 762.296 |