Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0467 ATGGCACGAACATCCCAACACAAGCAAATTATTGAAATCGAAGCTGATTATCACAATGGAGAGGACAGAAACATCATAGGAGGAACCAAGATTTGCGGGGAAGCACCTTGCGGATTCTCGGATGCAGGGTCCACTTCCAAGGATGCAAAAGAACGAGTAACTTCCATGCGAAGGCTACTAATCGCAGTCTCACTATGTATTATCTTCATGAGTGTAGAAATTTTTGGCGGCATCAAAGCCAATAGTCTTGCCATACTTACCGATGCGGCCCACTTGCTATCTGATGTGGCAGCCTTTGCCATCTCACTCTTCTCTCTGTGGGCCACGGGCTGGGAAGCTACACCTCGTCAGAGTTACGGGTTTTTCCGGGTCGAGATTTTAGGTACCTTAGTCTCGATCCAACTCATATGGTTACTAGCTGGGATCTTAGTATATGAGGCCATTGTTAGAATCATTCATGACACGGGTGATGTTAATGGGTTTTTAATGTTTTTAGTTGCTGCCTTTGGTCTAGTTGTTAATATCATCATGGCCGTCTTGCTTGGCCATGATCATGGTCATGGTCACAATCACGGACATGTTGATCATGGTCATGGGCTGATGGTTTCTACTACTTATCACCACCACGACGATCATGATCACCACCATGACGATCATGATCACCACCATGACGATCATGATCACCACCACGATCATGATCACCACCATGATCATGATTATACCCAGGAAGAGAATATACAACCACTCTTAAATAAACCGGAGAAGAGACAACGGAACATAAATGTGCAAGGGGCGTATCTCCATGTACTAGGGGACTCAGTTCAGAGTATAGGGGTAATGATTGGAGGGGCGATCATATGGTACAAGCCGGAGTGGAAGATTGTAGATTTGATCTGTACACTTGTTTTTTCAGTTATTGTTTTGGGTACGACGATTAGGATGCTTCGGAATATTCTAGAGGTTTTAATGGAGAGCACACCAAGAGAGATTGATGCAACAAAACTCCAAACGGGCTTATTGGAGATGGAAGAGGTTGTGGCCATTCATGAGCTTCACATTTGGGCCATAACCGTCGGAAAGGTCCTTTTGGCCTGTCATGTCAAAGTCCGGCCTGAAGCCGATGGTGACTCAGTCTTGGACAAGGTTGCAGATTATATAAGGAGGGAGTACAACATCAGTCACGTAACTATACAGATAGAGCGTTAG 1206 45.02 MARTSQHKQIIEIEADYHNGEDRNIIGGTKICGEAPCGFSDAGSTSKDAKERVTSMRRLLIAVSLCIIFMSVEIFGGIKANSLAILTDAAHLLSDVAAFAISLFSLWATGWEATPRQSYGFFRVEILGTLVSIQLIWLLAGILVYEAIVRIIHDTGDVNGFLMFLVAAFGLVVNIIMAVLLGHDHGHGHNHGHVDHGHGLMVSTTYHHHDDHDHHHDDHDHHHDDHDHHHDHDHHHDHDYTQEENIQPLLNKPEKRQRNINVQGAYLHVLGDSVQSIGVMIGGAIIWYKPEWKIVDLICTLVFSVIVLGTTIRMLRNILEVLMESTPREIDATKLQTGLLEMEEVVAIHELHIWAITVGKVLLACHVKVRPEADGDSVLDKVADYIRREYNISHVTIQIER 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2241184 2242943 + Conep14aG0047800.1 Cone14ag0467 452316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0467 401 MobiDBLite consensus disorder prediction 209 243 - -
Cone14ag0467 401 Pfam Cation efflux family 59 323 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone14ag0467 401 NCBIfam cation diffusion facilitator family transporter 56 401 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone14ag0467 401 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 330 400 IPR036837 -
Cone14ag0467 401 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 24 401 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cone14ag0467 401 Gene3D Cation efflux protein transmembrane domain 55 322 IPR027469 -
Cone14ag0467 401 SUPERFAMILY Cation efflux protein transmembrane domain-like 56 324 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0467 Cone-Chr14:2241184 Cone8ag0583 Cone-Chr8:4840321 8.34E-177 dispersed
Cone2ag0161 Cone-Chr2:838522 Cone14ag0467 Cone-Chr14:2241184 1.71E-11 transposed
Cone7ag1091 Cone-Chr7:8274402 Cone14ag0467 Cone-Chr14:2241184 9.19E-97 transposed
Cone14ag0467 Cone-Chr14:2241184 Cone15ag0501 Cone-Chr15:2403507 7.88E-213 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0467 K14689 - mdm:103416731 560.836