Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0470 ATGGGTTCCTCAAGCATTCCTAATAATCCTGTTCAAATCGAGACACAGGAAGATCAAGACTTCACTTGTGCATTGCGCCTAGTGGGTGGAATAGTCCTCCCCATGGCCATGCAATCCACCATAGACCTAGGCATTTTTTATAGTCTAGCTGAAGCGGGTGACGGAACCAAACTCTCTTCCTTAGAAATTGCAACCCGAATGAAAACCGATAACCCCAATGCACCCATGATGTTCGATCGCAAACTAAGGCTACTTGTTAGCCACTCTGTCCTTACTTGCTCAATGGTTGATCATGAAAATGATGCTAATATTATTGATCATGGCTTCATTAGGCTCTATGGTTTGGCCCCTGTGTCCATCCACTTTGTTAAGAATCAAGATGGTGTCTCTTTAGCCCCCCTGATGGCCTTGAATCAAGACAAGGTCTTCTTGGATAGTTGGTTCCAGCTCAAGGATGCGGTTTTTGAAGGAGGGATTTCATTCAATAGGGTGCATGGGATGCATGCTTTTGAATATCCCGGTGTTGACCAACTGTTCAATCAAGTTCTCAACAAAAGGATGCTTGATTACGCAACCATTGCTCTGAAGAAGGTTCTAGAATCTTACAAGGGTTTTGAAGAACTCAATTTCAAGCAATTTGTTGATGTAGGTGGTGGTTTAGGGATCATCCTTTCCTTAATTACCTCTAAATACCCTAATATAAAAGGCATTAATTTCGACTTACTTCATGTTATAGAACATGCCCCTCATTATCCCATCGACCAGCAGGGGCTACCTAATAATTGA 786 42.49 MGSSSIPNNPVQIETQEDQDFTCALRLVGGIVLPMAMQSTIDLGIFYSLAEAGDGTKLSSLEIATRMKTDNPNAPMMFDRKLRLLVSHSVLTCSMVDHENDANIIDHGFIRLYGLAPVSIHFVKNQDGVSLAPLMALNQDKVFLDSWFQLKDAVFEGGISFNRVHGMHAFEYPGVDQLFNQVLNKRMLDYATIALKKVLESYKGFEELNFKQFVDVGGGLGIILSLITSKYPNIKGINFDLLHVIEHAPHYPIDQQGLPNN 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2258367 2259417 - Conep14aG0048100.1 Cone14ag0470 452319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0470 261 FunFam Caffeic acid 3-O-methyltransferase 4 122 - -
Cone14ag0470 261 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 261 IPR016461 GO:0008168(InterPro)
Cone14ag0470 261 SUPERFAMILY Winged helix DNA-binding domain 16 125 IPR036390 -
Cone14ag0470 261 PANTHER O-METHYLTRANSFERASE 24 250 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cone14ag0470 261 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983(InterPro)
Cone14ag0470 261 Gene3D Vaccinia Virus protein VP39 123 259 IPR029063 -
Cone14ag0470 261 Gene3D - 4 121 IPR036388 -
Cone14ag0470 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 251 IPR029063 -
Cone14ag0470 261 Pfam O-methyltransferase domain 147 251 IPR001077 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0470 Cone-Chr14:2258367 Cone6ag0022 Cone-Chr6:150563 2.95E-88 dispersed
Cone14ag0470 Cone-Chr14:2258367 Cone14ag0471 Cone-Chr14:2262022 1.23E-151 tandem
Cone1ag1025 Cone-Chr1:55137199 Cone14ag0470 Cone-Chr14:2258367 6.89E-74 wgd
Cone14ag0470 Cone-Chr14:2258367 Cone5ag0732 Cone-Chr5:3154646 8.54E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0470 K13066 - mdm:103421923 273.478