Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0471 ATGGGTTCCTCAATCATTCTTAAGAATCTTGTTCAAGTCGAGCCTCAAGAAGATCAAGACTTCACTTATGCACTGCGTCTAGTGGGTGGAATAGTGCTGCCCATGGCCATGCAATCCGCCCTAGACCTAGGCATTTTCGATATTCTTGCTGAAGCCGGTGATGGAGCCAAACTCTCTGCCTTAGAAATCGCAACCCGAATCAAAACCGATAACCCTGATGCACCCATGATGCTCGACCGCATTCTAAGGCTACTTGTTAGTCACTCTGTCCTTTCTTGCTCTATGGGAGATCATGAAAATGATCCTAAAATTACTGATAATGGTTTCATTAGGCTCTATGGTTTGGCCCCAGTGTCCATCCACTTTGTTAAGAATCAAGATGGTGTCTCTTTAGCCCCCATGATGGCCTTGATTCAAGACAAAGTCTTCTTGGATAGCTGGTTCCAGCTCAAGGATGCGGTTCTTGAAGGAGGGATTCCATTCAATAGGGTGCATGGGATGCATGCTTTTGAATATCCCGGCGTCGATCAACGGTTCAATCAAGTTTTCAACAAAGGGATGCTTAATTACGCAACCATTGTTCTGAAGAAGGTTCTAGAATCTTACAAGGGTTTTGAAGAACTCAATTTCAAGCAATTGGTTGATGTTGGTGGTGGTTTAGGGATCACCATATCCTTAATTACCTCTGAATACCCTAATATTAAAGGCATTAATTTCGACTTGCCTCATGTTATAGAACATGCCCCTCATTATCCCGGGGTGGAACATGTTGGTGGAGATATGTTCAATAGTGTTCCAAAAGGAGATAACATTTTTATGAAGTGGATACTTCACGACTGGAGTGATGAAGCATGTGTGAAGCTGTTAAAGAATTGCTACAGTTCAATTCCAGATGATGGAAAGGTCATAGTTATGGACTCGATCGTTTCAATCATGCCGGAGACTAACCCTAACAGCAAGACGATCCATGAGCTTGATGTGGCCATGATGACTCAAAACCCAGGCGGCAAAGAAAGGACCCAACGGGAATTCATTGCTTTGGCCACTGCAGCTGGATTTAGCGGTGTCAGATTTGTGTGTCCAGTTTCTTTTCTATGGGTCATGGAATTCTTCAAATAG 1119 43.52 MGSSIILKNLVQVEPQEDQDFTYALRLVGGIVLPMAMQSALDLGIFDILAEAGDGAKLSALEIATRIKTDNPDAPMMLDRILRLLVSHSVLSCSMGDHENDPKITDNGFIRLYGLAPVSIHFVKNQDGVSLAPMMALIQDKVFLDSWFQLKDAVLEGGIPFNRVHGMHAFEYPGVDQRFNQVFNKGMLNYATIVLKKVLESYKGFEELNFKQLVDVGGGLGITISLITSEYPNIKGINFDLPHVIEHAPHYPGVEHVGGDMFNSVPKGDNIFMKWILHDWSDEACVKLLKNCYSSIPDDGKVIVMDSIVSIMPETNPNSKTIHELDVAMMTQNPGGKERTQREFIALATAAGFSGVRFVCPVSFLWVMEFFK 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2262022 2263418 - Conep14aG0048200.1 Cone14ag0471 452320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0471 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 370 IPR029063 -
Cone14ag0471 372 Gene3D - 6 121 IPR036388 -
Cone14ag0471 372 FunFam Caffeic acid 3-O-methyltransferase 6 122 - -
Cone14ag0471 372 PANTHER O-METHYLTRANSFERASE 22 357 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cone14ag0471 372 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983(InterPro)
Cone14ag0471 372 FunFam Caffeic acid O-methyltransferase 123 372 - -
Cone14ag0471 372 SUPERFAMILY Winged helix DNA-binding domain 16 125 IPR036390 -
Cone14ag0471 372 Gene3D Vaccinia Virus protein VP39 123 372 IPR029063 -
Cone14ag0471 372 PIRSF O-mtase 3 372 IPR016461 GO:0008168(InterPro)
Cone14ag0471 372 Pfam O-methyltransferase domain 147 354 IPR001077 GO:0008171(InterPro)
Cone14ag0471 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 372 IPR016461 GO:0008168(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0471 Cone-Chr14:2262022 Cone6ag0022 Cone-Chr6:150563 1.85E-168 dispersed
Cone14ag0470 Cone-Chr14:2258367 Cone14ag0471 Cone-Chr14:2262022 1.23E-151 tandem
Cone14ag0471 Cone-Chr14:2262022 Cone14ag0472 Cone-Chr14:2265233 1.43E-67 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0471 K13066 - mdm:103421923 481.87