Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0472 ATGTACAGGTTCCAGCTCAAGGATGCGGTTCTTGAAGAAGGGATTCCATTCAACAGGGCGGACGGGATGCATGCTTTTGAATATCCAAGCATTGACCGAAGGTTCAATAAAGTTTTCAACAACAAAGCAAGGCTTAATTACACAACCATTATTCTGAAGAAGGTTCTAGATTCTTACAAGGGTTTTGAAGTAGTCAATTTCAAGCAATTGGTTGATGTAGGTGGTGGCTTAGGGATCACCCTTTCCTTAATTACCTCTAAATACCCTAATATTAAAGGCAGTAAATTCGACTTGCCTCATGTTATAGAACATGACTCTCACTATCCCTATCCCGGTATGGGGGTGAAACATGGTGGAGGAGATATGTTCCGGAGTGTTCCAAAAGGAGAGAACATCTTTATGAAGAATTGTTAG 414 40.82 MYRFQLKDAVLEEGIPFNRADGMHAFEYPSIDRRFNKVFNNKARLNYTTIILKKVLDSYKGFEVVNFKQLVDVGGGLGITLSLITSKYPNIKGSKFDLPHVIEHDSHYPYPGMGVKHGGGDMFRSVPKGENIFMKNC 137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2265233 2265805 - Conep14aG0048300.1 Cone14ag0472 452321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0472 137 Gene3D Vaccinia Virus protein VP39 36 136 IPR029063 -
Cone14ag0472 137 Gene3D - 19 55 IPR036388 -
Cone14ag0472 137 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 137 IPR029063 -
Cone14ag0472 137 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 137 IPR016461 GO:0008168(InterPro)
Cone14ag0472 137 PANTHER O-METHYLTRANSFERASE 6 135 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Cone14ag0472 137 Pfam O-methyltransferase domain 5 136 IPR001077 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0472 Cone-Chr14:2265233 Cone6ag0022 Cone-Chr6:150563 2.54E-50 dispersed
Cone14ag0471 Cone-Chr14:2262022 Cone14ag0472 Cone-Chr14:2265233 1.43E-67 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0472 K13066 - sly:101261963 167.933