Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0490 ATGACTCGAGCTAAGGACATGGAGAGGATTCAGGAGCTGAAAGCATATCCCGTAAAAGTGCCCTTAGAGAAGGTTCTAGAATCAAAGAAACTACCGGAAAAGTTGTGTGTTGTGGCTGAGGTTTCAAATGCTCATACAGCCTCAGGAAAGGAAGAATTCAAGTTATCAAATGCTCGCTTTGCTTTGGTAAGAGAAGTCAGTCGATCTGATGGATGGGATTCTCCTGATTCAGGCTCTCCTGTTCCTGCACCATCTGTCAGAACATGGAAAGGAAAAGCCTCTTTGTCCGAGCCAGAAGAAGAGCACAAGCCTGAAATCACATTCAAAGGAAAAAATGGCTGTTCATTAGAGGCTGGCCTTACTTCTTTCTCTGGTGCATCTCATCCTTCAGAGCCCATTGATAACGATCCTATGAGAACTGTTTATGTTCCAGTTGATCGGAATAAATCCGAAGTTGGACGTTTGATGAAGAGCTTGTCTAAAAAGGGTCCTCCTCTAGGGCTTGCTAAGAAACCTACCTCTGCTATTCCTTCGTCCGTAGAAAACTTGGTTGAAGAAGAACCCAATGACATGCGAAAACCCGAGAAATCACCTCTTCCTCAAGATTCAGAGGAAAGGGATTGTGTTTGGGATGCTTCCTTCCCTCCTAGTGCCAATGCAAGTCCACATAGTAGTATTGAAAGCACTGATGTTATGACTATGAGAATGATGAACAGTAGATGTTCTGGTACATATCAGAGTGAAGAAAATGATTTGCTTACTGTGGAAAGGAACTGTGAAACTAGGAAACAAAGTAGTAGAGTGGCTTCACTTGAGAGTGCAAAGACAAGTATTAGCCGAGCAAGTGATAGTAGCGGTCTTAGTGATGAGAGTAATTGGAGCAACATAACTGGAAGTGCTAATAAGCCTCATAAAGGGAACGATCCAAGGTGGATGGCTATTCTTGCTATCAGAACAAGAGATGGGATGTTGGGCATGAGTCATTTTAAATTGCTCAAAAGGCTCGGCTGTGGTGATATTGGTAGTGTTTATCTGTCGGAACTTACTGGGACTCGCTGTTGCTTTGCAATGAAAGTGATGGACAAGGCGTCGCTTGAAAGCAGGAAGAAGTTGCAAAGGGCTCAGACTGAAAGAGAGATTTTGCATCTTCTGGACCACCCATTTCTACCCACTTTGTATACACATTTTGAGACTGATAGATTCACCTGTTTAGTTATGGAATATTGTCCAGGAGGTGATCTTCACACCTTGAGGCAACGTCAACCTAGAAAACATTTCTCTGAGTATGCTGCAAGATTCTATGCAGCAGAGGTCCTTTTAGCTCTAGAGTATCTTCACATGCTAGGAGTAATATACAGAGACTTAAAACCCGAAAATGTACTAGTCCGTGATGATGGTCACATAATGCTCTCGGACTTTGACCTTTCCCTAAGATGCACCGTTTCACCCACTTTAGTACTTGAATCGGACCCATCAAGGCGGTTAGCCGGCGGCTCATTCTGTGTCCAGCCAACTTGCACCGAGTCCTCATCGGTCTGTATCCAACCCTCCTGCTTCATTCCACGCATCTTCCCTCAGAAAAGCAAAAAGAACCAAAAGCCTAGAACCGAGTCCAGTTCGTTCTCAACCAATAGTCTTCCAGAGCTCTTGGCAGAGCCCACCACCGCCAGGTCCATGTCATTTGTCGGGACCCACGAGTACTTAGCCCCTGAAATAATCAAAGGAGAGGGTCATGGAAGTGCGGTCGATTGGTGGACATTCGGGATCTTCTTGCATGAACTATTATACGGCAAGACCCCATTCAAAGGGTCAGGGAACAGAGCCACGCTGTTCAATGTTGTGGGCCAGCAGCTCAAGTTTCCAGACTCACCGGCTACTAGCTACGCTGGTCGGGACCTGATCCGGGGCTTGCTTGCTAAGGAGCCGCAGAATCGGCTGGGGGTTAAGAGAGGGGCAACTGAGATAAAGCAGCACCCTTTCTTTGAAGGTGTGAACTGGGCATTGATCCGGTGCAGCACCCCACCTGAAGTGCCTCCTAGACCGGTGGATCCCGAGCTTACTCAGAAGATCAGGGCCGTTGATAACAGTATTGGCATTGGCAACAATAATAATGGTAAGAGGCCGGTGGGCCCGGACATGAAACCTGGAGGTACTTATCTGGACTTCGAGTTCTTTTGA 2178 46.33 MTRAKDMERIQELKAYPVKVPLEKVLESKKLPEKLCVVAEVSNAHTASGKEEFKLSNARFALVREVSRSDGWDSPDSGSPVPAPSVRTWKGKASLSEPEEEHKPEITFKGKNGCSLEAGLTSFSGASHPSEPIDNDPMRTVYVPVDRNKSEVGRLMKSLSKKGPPLGLAKKPTSAIPSSVENLVEEEPNDMRKPEKSPLPQDSEERDCVWDASFPPSANASPHSSIESTDVMTMRMMNSRCSGTYQSEENDLLTVERNCETRKQSSRVASLESAKTSISRASDSSGLSDESNWSNITGSANKPHKGNDPRWMAILAIRTRDGMLGMSHFKLLKRLGCGDIGSVYLSELTGTRCCFAMKVMDKASLESRKKLQRAQTEREILHLLDHPFLPTLYTHFETDRFTCLVMEYCPGGDLHTLRQRQPRKHFSEYAARFYAAEVLLALEYLHMLGVIYRDLKPENVLVRDDGHIMLSDFDLSLRCTVSPTLVLESDPSRRLAGGSFCVQPTCTESSSVCIQPSCFIPRIFPQKSKKNQKPRTESSSFSTNSLPELLAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPDSPATSYAGRDLIRGLLAKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPPRPVDPELTQKIRAVDNSIGIGNNNNGKRPVGPDMKPGGTYLDFEFF 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2403091 2406770 + Conep14aG0050100.1 Cone14ag0490 452339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0490 725 FunFam serine/threonine-protein kinase D6PK-like 413 480 - -
Cone14ag0490 725 Gene3D Phosphorylase Kinase; domain 1 327 408 - -
Cone14ag0490 725 MobiDBLite consensus disorder prediction 67 111 - -
Cone14ag0490 725 Gene3D Transferase(Phosphotransferase) domain 1 409 477 - -
Cone14ag0490 725 MobiDBLite consensus disorder prediction 264 302 - -
Cone14ag0490 725 MobiDBLite consensus disorder prediction 260 304 - -
Cone14ag0490 725 Pfam Protein kinase domain 558 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0490 725 Pfam Protein kinase domain 330 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0490 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0490 725 PANTHER FLIPPASE KINASE 1-RELATED 234 687 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone14ag0490 725 SMART serkin_6 329 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0490 725 MobiDBLite consensus disorder prediction 93 108 - -
Cone14ag0490 725 FunFam Serine/threonine-protein kinase D6PK-like 327 412 - -
Cone14ag0490 725 FunFam serine/threonine-protein kinase D6PK-like 556 679 - -
Cone14ag0490 725 ProSiteProfiles Protein kinase domain profile. 329 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0490 725 MobiDBLite consensus disorder prediction 185 209 - -
Cone14ag0490 725 SUPERFAMILY Protein kinase-like (PK-like) 310 685 IPR011009 -
Cone14ag0490 725 MobiDBLite consensus disorder prediction 159 226 - -
Cone14ag0490 725 Gene3D Transferase(Phosphotransferase) domain 1 557 680 - -
Cone14ag0490 725 CDD STKc_phototropin_like 327 685 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0490 Cone-Chr14:2403091 Cone5ag1793 Cone-Chr5:12725115 3.43E-213 dispersed
Cone9ag1115 Cone-Chr9:7183955 Cone14ag0490 Cone-Chr14:2403091 8.98E-118 transposed
Cone11ag0540 Cone-Chr11:3027379 Cone14ag0490 Cone-Chr14:2403091 0 wgd
Cone14ag0490 Cone-Chr14:2403091 Cone15ag0519 Cone-Chr15:2535127 0 wgd
Cone14ag0490 Cone-Chr14:2403091 Cone18ag0964 Cone-Chr18:7023430 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82083 PF03479 PCC 1.10E-25 CL0615 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0490 - - - 0.0