Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0506 ATGGAGCACCATATCAACATTGAGAATTGTGAAGCTCATCATGAAGCTTCTTTTGGCTCTTCTTCTACCACCACCTCCACTTCTTCCTCCTCTTCCACCTCCACCTTCTCCTCACACATGGAAGATTGTCCGGCTCAAAAACGTTCTAGAATATCTAATCATGACGCCGACAGTGACAATGATATGACCGATATAACTAATAAGAAACTAAAGAGTGAAGTCAGTGGTAGTGGTAATAGTAATGGTAAAGATACGAAGCACCCGACATATCGAGGAGTAAGAATGCGAAATTGGGGCAAATGGGTGTCGGAAATTCGAGAACCGAGAAAGAAGTCGAGGATTTGGCTCGGAACTTACCCAACAGCTGAAATGGCAGCTCGAGCTCATGATGTAGCCTCATTAGCCATTAAAGGCAGCTCGGCTTACCTTAATTTCCCCGAACTAGAAAAAAATCTCCCCCGCCCGCTCTCCACATCTCCCAAGGACATACAAGCTGCAGCTGCCGAGGCCGCCGCTGAGACATTTCTAGAGACAGTCAGTCAGGGCGAAATGACAGAATTAGCTACAGTTGATCATCATGATCAGACATTGAGCCAAGCCGAGCTTTCTAAATCAGATACGTCACGTGCGGAATCGACAAGTTCTCATTCAAACAATAATATTGATGATAATCACTATGACGACACATTGTTCGACCTACCAGATCTCCCTCTCGATGGCTCCGATCGAAACAACGATATCGATGGATTGTTCTATTTTTCTTCTTGTTCTCCTAATTGGCAGCTTTGTGAAGCCGATAGTGGGTTTCGGCTTGATCAGGAGCCATGTGATCAATGGGAGTTCTACAACGACAGCTTTCCTAGCTAA 867 45.21 MEHHINIENCEAHHEASFGSSSTTTSTSSSSSTSTFSSHMEDCPAQKRSRISNHDADSDNDMTDITNKKLKSEVSGSGNSNGKDTKHPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVASLAIKGSSAYLNFPELEKNLPRPLSTSPKDIQAAAAEAAAETFLETVSQGEMTELATVDHHDQTLSQAELSKSDTSRAESTSSHSNNNIDDNHYDDTLFDLPDLPLDGSDRNNDIDGLFYFSSCSPNWQLCEADSGFRLDQEPCDQWEFYNDSFPS 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2492981 2494253 + Conep14aG0051700.1 Cone14ag0506 452355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0506 288 FunFam Ethylene-responsive transcription factor 2 88 147 - -
Cone14ag0506 288 MobiDBLite consensus disorder prediction 1 90 - -
Cone14ag0506 288 ProSiteProfiles AP2/ERF domain profile. 89 146 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 Gene3D AP2/ERF domain 89 147 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 SUPERFAMILY DNA-binding domain 89 146 IPR016177 GO:0003677(InterPro)
Cone14ag0506 288 CDD AP2 90 148 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 MobiDBLite consensus disorder prediction 15 42 - -
Cone14ag0506 288 MobiDBLite consensus disorder prediction 198 220 - -
Cone14ag0506 288 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 78 239 IPR051032 -
Cone14ag0506 288 SMART rav1_2 89 152 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 MobiDBLite consensus disorder prediction 43 68 - -
Cone14ag0506 288 Pfam AP2 domain 89 138 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 MobiDBLite consensus disorder prediction 69 86 - -
Cone14ag0506 288 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone14ag0506 288 MobiDBLite consensus disorder prediction 198 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0506 Cone-Chr14:2492981 Cone17ag1123 Cone-Chr17:8317270 5.44E-43 dispersed
Cone14ag0506 Cone-Chr14:2492981 Cone15ag0529 Cone-Chr15:2592911 3.09E-101 wgd
Cone14ag0506 Cone-Chr14:2492981 Cone6ag0657 Cone-Chr6:3328609 7.43E-32 wgd
Cone14ag0506 Cone-Chr14:2492981 Cone9ag0662 Cone-Chr9:3150302 1.49E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44745 PF04258 Peptidase_A22B 1.20E-83 CL0130 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0506 - - - 0.0