Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone14ag0513 | ATGCCGGAGACGAAGGCTTTTTGGAGGGAAATGTTGGACTACGAATGGGGAAACCCGTCAACGATGATGTTTCCCGGCGAAGAACAAGAAGGAGGAGGAGGAGAAGGGTCCGAACCGAATTCTGAAACCGACCCGGCCCAACAGATCATGGACCACTACGCGTCTTCCACTCATCAGACTAACTTCAGTATTAACATTGACCAAAACAATACTATCAACCACCACCACCACCTTCCACCTACTCACCAACAACCCTCCGCCGCCGTAACTACTTTCTCTCACCACCACTTTAACCACCACCATCCTCAGGCCCACTTGACGAGTCCTACGTTCTACTACCCACGCGCTGACGTCACCGGGTCCCACTACGCGCCCCAACCTGGCCACCACCAGTACCCATTGCTCTCGCTCGACCCAACCTTCTCCAGCGTAGGAGGCGGAGGAGATGAGGCCCACGGGTTTTTACTAGTACCAAAAAACGAGGACGTGACGTTGCGGACAGGAGCCGGGCCCATGGATTTTGCGTCGAGGATTGGGCTGAATTTGGGAGGCCGTACTTATTTCTCTTCCTCGGAGGATGACTTTGTGAGCCGGCTCTACCGGCGTTCCAGACCGGCTCAAGACCCAGCCTCGTCTAACTCGCCCAGGTGTCAGGCCGAGGGGTGCAATGCCGACATGACTCACGCCAAACATTACCACCGCCGTCACAAGGTGTGCGAGTTTCATTCCAAGGCCTCTGCAGTCATCGCCGCCGGGCTGACTCAGCGTTTCTGCCAGCAGTGCAGCAGATTTCATGTTCTGGCGGAGTTTGATAACGGGAAACGGAGCTGCCGGAAGAGATTGGCGGACCACAACCGAAGAAGGCGGAAAACGCAGCTCACTAATCCAGAAAATGCTCCTAAGTCACAGCTTGATCACAACGCGGCCTCACCGTCCGATCATTCTACTCCTCTTTCCAGGTCACCAGCAGATTCCGGAGCTCATTCAACATCGTCTGTAACCGTTGCAATGTCCCCGCCGAGGATGACTCTGGATTGCTTTCAGCAAAGGACAACTTATCCGGCAGCCGCCACCGCATCTTCCGCGTCTTCAAGCTCACTTTTTTTCTCTGGTTCCTAG | 1119 | 54.96 | MPETKAFWREMLDYEWGNPSTMMFPGEEQEGGGGEGSEPNSETDPAQQIMDHYASSTHQTNFSINIDQNNTINHHHHLPPTHQQPSAAVTTFSHHHFNHHHPQAHLTSPTFYYPRADVTGSHYAPQPGHHQYPLLSLDPTFSSVGGGGDEAHGFLLVPKNEDVTLRTGAGPMDFASRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAQDPASSNSPRCQAEGCNADMTHAKHYHRRHKVCEFHSKASAVIAAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQLTNPENAPKSQLDHNAASPSDHSTPLSRSPADSGAHSTSSVTVAMSPPRMTLDCFQQRTTYPAAATASSASSSSLFFSGS | 372 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2555290 | 2557782 | + | Conep14aG0052400.1 | Cone14ag0513 | 452362 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone14ag0513 | 372 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 13 | 338 | IPR044817 | GO:0003677(InterPro) | |
Cone14ag0513 | 372 | MobiDBLite | consensus disorder prediction | 18 | 45 | - | - | |
Cone14ag0513 | 372 | FunFam | Squamosa promoter-binding-like protein 14 | 209 | 278 | - | - | |
Cone14ag0513 | 372 | MobiDBLite | consensus disorder prediction | 281 | 340 | - | - | |
Cone14ag0513 | 372 | Gene3D | - | 208 | 278 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Cone14ag0513 | 372 | ProSiteProfiles | Zinc finger SBP-type profile. | 214 | 291 | IPR004333 | GO:0003677(InterPro) | |
Cone14ag0513 | 372 | MobiDBLite | consensus disorder prediction | 295 | 340 | - | - | |
Cone14ag0513 | 372 | Pfam | SBP domain | 217 | 290 | IPR004333 | GO:0003677(InterPro) | |
Cone14ag0513 | 372 | SUPERFAMILY | SBT domain | 215 | 294 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0513 | Cone-Chr14:2555290 | Cone17ag0385 | Cone-Chr17:1823945 | 1.72E-32 | dispersed | |
Cone11ag0566 | Cone-Chr11:3198762 | Cone14ag0513 | Cone-Chr14:2555290 | 1.99E-31 | wgd | |
Cone14ag0513 | Cone-Chr14:2555290 | Cone15ag0539 | Cone-Chr15:2661415 | 3.41E-193 | wgd | |
Cone14ag0513 | Cone-Chr14:2555290 | Cone18ag0932 | Cone-Chr18:6739327 | 1.54E-30 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44747 | PF00291 | PALP | 1.00E-56 | CL0063 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone14ag0513 | - | - | - | 0.0 |