Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone14ag0548 | ATGGAGGAAGACTTCGATTTTGCAGCTGCAAACAACATGAACGAACTCGACGACATGGATATTCCGGAGGATGATGCGACTAGCCCTGTGCAAAAGGTTGGCGAGGAGAAAGAGATCGGAACGGACGGGCTCAGGAAGAAGCTCGTCAAGGAAGGTGAAGGATGGGAGACTCCGAGCACTGGAGATGAAGTCGAAGTGCATTACACTGGAACTCTGCTTGATGGAACCCAGTTTGATTCGAGCCGTGATCGAGGGACCCCTTTCAAGTTCAAGCTTGGTCAAGGACAAGTGATCAAAGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCCATTTTCACCATTCCTTCTGAGTTAGCCTATGGTGAGGCTGGATCTCCTCCTACCATTCCTCCCAATGCCACTCTTCAATTCGACGTTGAGTTGCTATCCTGGACTAGTGTCAAAGACATTTGCAAAGATGGAGGTATTTTCAAGAAGATTTTGGTTGAAGGAGAGAAATGGGAAAACCCAAAAGACCTGGATGAAGTACTTGTAAAATATGAAGCTCGTCTTGAAGATGGAACTGTCGTTTCAAAGGCTGATGGGGTGGAATTCACTGTAGGAGATGGCCATTTTTGCCCTGCTTTGGCCAAAGCTGTGAAGACAATGAAGAAGGGGGAGAAAGTCCTGTTGACAGTGAAACCGCAATATGCATTTGGGGAGACGGGTAGGTCTGCATCAGGCAATGAAGGTGCTGTGCCTCCTAATGCCGCTCTCCACATTACTCTTGAATTGGTGTCATGGAACTCTGTTTCTGAGATAACCAAAGACCAGAAGGTCTTAAAGAAGACCCTAAAGGAGGGAGAAGGATATGAGCGTCCAAATGATGGTGCAGTGGTGCAAGTGAAACTAATTGGGAAGCTTCAAAATGGGACTATCTTTGTGAAGAAGGGTCATGACAAGGAACCATTTGAATTCAAAACTGACGAGGAGCAAGTTATTGATGGGCTTGACAGGGCTGTGAAGAACATGAAGAAAGGGGAAGTAGCACTTGTGACCATACAGCCAGAATATGCTTTTGGTGTATCCGACTCTTCACAAGAACTTGCTGTTGTTCCTTCAAATTCGACTGTGTATTATGAGGTCGAGCTAGTTTCTTTTGTCAAGGAGAAGGAATCTTGGGATCTGAAGGATGGTCAGGAGAAGATTGAAGCTGCAGTGAAGAAGAAAGAGGAAGGGAATGCATTGTACAAGGCACATAAATATGAAAGAGCCTCAAAGAGATATGAAAAGGCTGTGAAGTTCATCGAGTATGATTCGACATTCAGTGATGAAGAGAAGCAGCAGGCTAAGTTGCTCAAAATTTCCTGCAATCTCAATGATGCAGCCTGCAAGCTGAAGCTTAAAGATTACAATCAGGCTGCGAAACTCTGCACAAAGGTGTTAGAACTTGACAGTCGAAATGTGAAAGCTCTTTATAGAAGGGCACAAGCATATATCCAGCTTGTTGACTTGGATTTGGCCGAGCAGGATATCAAGAAAGCCCTTGAGATAGACCCAGATAACAGAGACGTGAAGTTGGAGTATAGAGTTCTAAAGGAAAAGGTCAGGGAGTACAACAAGAAAGATGCGCAGTTTTACGGCAACATATTTGCCAAACTGAACAAGGTGGAGCAAGCAAAATCAGAACAAAAAGGCTGA | 1692 | 44.74 | MEEDFDFAAANNMNELDDMDIPEDDATSPVQKVGEEKEIGTDGLRKKLVKEGEGWETPSTGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPSELAYGEAGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILVEGEKWENPKDLDEVLVKYEARLEDGTVVSKADGVEFTVGDGHFCPALAKAVKTMKKGEKVLLTVKPQYAFGETGRSASGNEGAVPPNAALHITLELVSWNSVSEITKDQKVLKKTLKEGEGYERPNDGAVVQVKLIGKLQNGTIFVKKGHDKEPFEFKTDEEQVIDGLDRAVKNMKKGEVALVTIQPEYAFGVSDSSQELAVVPSNSTVYYEVELVSFVKEKESWDLKDGQEKIEAAVKKKEEGNALYKAHKYERASKRYEKAVKFIEYDSTFSDEEKQQAKLLKISCNLNDAACKLKLKDYNQAAKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAEQDIKKALEIDPDNRDVKLEYRVLKEKVREYNKKDAQFYGNIFAKLNKVEQAKSEQKG | 563 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 2729130 | 2732682 | + | Conep14aG0056000.1 | Cone14ag0548 | 452397 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone14ag0548 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 177 | 266 | IPR001179 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | SUPERFAMILY | TPR-like | 399 | 551 | IPR011990 | GO:0005515(InterPro) | |
| Cone14ag0548 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 61 | 149 | IPR001179 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | FunFam | Peptidylprolyl isomerase | 34 | 152 | - | - | |
| Cone14ag0548 | 563 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 30 | 148 | IPR050754 | - | |
| Cone14ag0548 | 563 | Gene3D | - | 37 | 152 | IPR046357 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | SUPERFAMILY | FKBP-like | 153 | 267 | - | - | |
| Cone14ag0548 | 563 | Gene3D | - | 153 | 266 | IPR046357 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | Gene3D | - | 267 | 387 | IPR046357 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | SMART | tpr_5 | 452 | 485 | IPR019734 | GO:0005515(InterPro) | |
| Cone14ag0548 | 563 | SMART | tpr_5 | 403 | 436 | IPR019734 | GO:0005515(InterPro) | |
| Cone14ag0548 | 563 | SMART | tpr_5 | 486 | 519 | IPR019734 | GO:0005515(InterPro) | |
| Cone14ag0548 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 288 | 382 | IPR001179 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 172 | 263 | IPR001179 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 55 | 146 | IPR001179 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | MobiDBLite | consensus disorder prediction | 29 | 45 | - | - | |
| Cone14ag0548 | 563 | Gene3D | Tetratricopeptide repeat domain | 388 | 546 | IPR011990 | GO:0005515(InterPro) | |
| Cone14ag0548 | 563 | Coils | Coil | 519 | 539 | - | - | |
| Cone14ag0548 | 563 | ProSiteProfiles | TPR repeat profile. | 486 | 519 | IPR019734 | GO:0005515(InterPro) | |
| Cone14ag0548 | 563 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Cone14ag0548 | 563 | SUPERFAMILY | FKBP-like | 13 | 153 | - | - | |
| Cone14ag0548 | 563 | FunFam | Peptidylprolyl isomerase | 390 | 546 | - | - | |
| Cone14ag0548 | 563 | SUPERFAMILY | FKBP-like | 271 | 395 | - | - | |
| Cone14ag0548 | 563 | FunFam | Peptidylprolyl isomerase | 153 | 266 | - | - | |
| Cone14ag0548 | 563 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 294 | 385 | IPR001179 | GO:0003755(InterPro) | |
| Cone14ag0548 | 563 | FunFam | Peptidylprolyl isomerase | 267 | 387 | - | - | |
| Cone14ag0548 | 563 | Pfam | Tetratricopeptide repeat | 486 | 519 | IPR019734 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag1435 | Cone-Chr11:10231971 | Cone14ag0548 | Cone-Chr14:2729130 | 1.84E-12 | dispersed | |
| Cone14ag0548 | Cone-Chr14:2729130 | Cone17ag0894 | Cone-Chr17:7037509 | 5.76E-174 | dispersed | |
| Cone19ag0647 | Cone-Chr19:5542991 | Cone14ag0548 | Cone-Chr14:2729130 | 1.19E-127 | transposed | |
| Cone14ag0548 | Cone-Chr14:2729130 | Cone15ag0569 | Cone-Chr15:2863758 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone14ag0548 | K09571 | - | mdm:103415797 | 944.495 |