Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0592 ATGTTATCAGCCTGGAATCCAGCAAGTTCGAGGGCGGATTTTGTGGTGGCGAAGGATGGTTTTGGGAGCCACACAACAATTAGTGATGCAGTGGGGGCAGTAGCCAGAATGAGAGATAGACGATCTCAAAGAGTTGTAATTTATGTGAAAGCAGGTGTCTATAATGAAAAGGTAGAAATTGAGAGGGGCATGAATAATATTATGTTTGTTGGTGATGGTATGGACAAAACAATAGTCTCTGCCAATCGAAATGTACCCGACGGTTCAACCACTTTCGATTCAGCCACATTTGGAGTGGCGGGAGATGGGTTTTGGGCGAGAGACATGACGTTCGAAAACACGGCAGGGCCTCAGAAGCATCAAGCAGTGGCACTGAGAGTAAACTCAGACCGATCCGTGTTCTACCGATGTAGCATCAAAGGATATCAAGACACACTCTTTGTACACTCACTACGACAGTTTTACCGAGATTGTCAAATATACGGGACTATTGATTTCATATTCGGCGATGCTTCTGCCATTTTCCAAAACTGCGACATACTAGTACGACGCCCCATGGCTCACCAAGCTAACATGATCACGGCACAAGGTCGAGAGGAGCTAATGATGAACACGGGGATTTCTATACAAAATTGCCGTGTAAAGCCCGCGCCAGAGTTTATTAGGGTTAAGAATTCATTCAAGACTTATTTAGGGAGGCCGTGGAAGAAGTATTCGAGAACGGTTTTCCTGAAGACAGATTTAGATGGTTTGATTGACCCGAGAGGGTGGATGCAGTGGGAAGGAAGTTTTGGTCTTTCGACGTTGTATTATGCCGAGTATATGAATACTGGGGTTGGTGCTTTGACTCAACGGAGGGTTAAATGGCCCGGTTTTCATGTGCTTCAAAGAGCTGAACAAGTTCAGCCTTTTACGGTGAGTAATTTTATTCAAGGACATTTATGGATCCCCATGACCGGTGTGCCTTTTTCTTCAAATGTATGA 984 44.82 MLSAWNPASSRADFVVAKDGFGSHTTISDAVGAVARMRDRRSQRVVIYVKAGVYNEKVEIERGMNNIMFVGDGMDKTIVSANRNVPDGSTTFDSATFGVAGDGFWARDMTFENTAGPQKHQAVALRVNSDRSVFYRCSIKGYQDTLFVHSLRQFYRDCQIYGTIDFIFGDASAIFQNCDILVRRPMAHQANMITAQGREELMMNTGISIQNCRVKPAPEFIRVKNSFKTYLGRPWKKYSRTVFLKTDLDGLIDPRGWMQWEGSFGLSTLYYAEYMNTGVGALTQRRVKWPGFHVLQRAEQVQPFTVSNFIQGHLWIPMTGVPFSSNV 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2935245 2936376 + Conep14aG0060600.1 Cone14ag0592 452441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0592 327 Gene3D - 8 327 IPR012334 -
Cone14ag0592 327 ProSitePatterns Pectinesterase signature 2. 160 169 IPR033131 -
Cone14ag0592 327 PANTHER PECTINESTERASE 12 317 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cone14ag0592 327 SUPERFAMILY Pectin lyase-like 10 325 IPR011050 -
Cone14ag0592 327 Pfam Pectinesterase 13 312 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone14ag0592 327 FunFam Pectinesterase 7 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0592 Cone-Chr14:2935245 Cone6ag0383 Cone-Chr6:1864724 2.07E-133 dispersed
Cone14ag0592 Cone-Chr14:2935245 Cone9ag0410 Cone-Chr9:1895925 3.17E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0592 K01051 - ath:AT3G60730 514.612