Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0604 ATGCGTAGTATTGCTGCTATTGGCAAGAAAAAGGCAGGGGAGAAGAAGATAAGAAGGCCAGTACATGCTTTTCAGACAAGAAGCCAAGTTGATATACTTGATGATGGTTATAGATGGAGAAAATATGGACAAAAAGCTGTCAAGAACAACAAATTCCCTAGGAGCTACTATAAGTGCACGTATCAAGGTTGCAATGTGAAAAAGCAAGTCCAACGATTAACTAGAGATGAAGGGATCGTCGTGACAAGTTACGAAGGCAGACATACCCATGTCATTGACAAATCCACTGATAATTTCGAGCATATTTTAAGCCAGATGCAGATTTATTCTTCTTCCTCTTATTAA 345 38.84 MRSIAAIGKKKAGEKKIRRPVHAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYKCTYQGCNVKKQVQRLTRDEGIVVTSYEGRHTHVIDKSTDNFEHILSQMQIYSSSSY 114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2996493 2997965 + Conep14aG0061800.1 Cone14ag0604 452453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0604 114 ProSiteProfiles WRKY domain profile. 28 93 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0604 114 Gene3D WRKY domain 17 92 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0604 114 SMART WRKY_cls 33 92 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0604 114 FunFam WRKY transcription factor 57 19 93 - -
Cone14ag0604 114 Pfam WRKY DNA -binding domain 34 90 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0604 114 SUPERFAMILY WRKY DNA-binding domain 25 90 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0604 114 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 95 IPR044810 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0604 Cone-Chr14:2996493 Cone16ag1003 Cone-Chr16:9799442 2.59E-58 dispersed
Cone14ag0604 Cone-Chr14:2996493 Cone2ag0036 Cone-Chr2:196168 9.79E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44754 PF00454 PI3_PI4_kinase 6.40E-17 CL0016 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0604 - - - 0.0