Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0621 ATGGAGGTAGGAAATATGATTGAACACAAAAGATCAGGGCCTTGCTCGAATATTGATGAGAATTCTCTCATGTCTTTTACCCCGAAACGGCACAAGCCCCGTTTCTCCATCTCCTCTAAGGAATCGAAAGAGAAGCTCGGTCAACGAGTTGTAGCTTTGCAAGAGCTTGTGTCTCCATTTGGAAAGACGGATACCGCTTCTGTGCTTTTTGAAGCGATGGGGTATATACAGTTCCTTCACGAACAAGTTAAGGTTCTGAGTGCTCCATACCTGCAAAGCTCACCAAAGGCTAACATGCAGGGACTAGAGCAATACAGCCTGAGAAGCAGAGGCTTATGTCTTGTTCCAGTTTCTCATACTGCGGGAGTTACGGGCAGCAATGGGGCCGACATTTGGGCACCTGTCAAAACTACTACTACTTCCAACAAATTCGAGAACAAGACATAA 447 45.86 MEVGNMIEHKRSGPCSNIDENSLMSFTPKRHKPRFSISSKESKEKLGQRVVALQELVSPFGKTDTASVLFEAMGYIQFLHEQVKVLSAPYLQSSPKANMQGLEQYSLRSRGLCLVPVSHTAGVTGSNGADIWAPVKTTTTSNKFENKT 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3115120 3116558 - Conep14aG0063500.1 Cone14ag0621 452470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0621 148 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 96 IPR036638 GO:0046983(InterPro)
Cone14ag0621 148 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 30 79 IPR011598 GO:0046983(InterPro)
Cone14ag0621 148 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 119 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cone14ag0621 148 CDD bHLH_AtbHLH_like 36 87 IPR045239 -
Cone14ag0621 148 FunFam Transcription factor bHLH113 family 29 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0621 Cone-Chr14:3115120 Cone8ag1099 Cone-Chr8:9829962 9.09E-31 dispersed
Cone14ag0621 Cone-Chr14:3115120 Cone15ag0629 Cone-Chr15:3296109 1.08E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0621 - - - 0.0