Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0637 ATGGCGGGAGAATCAGCGGATCCGAACCACGGTAATCCGCCTTCAACGCCGGATTCGCCAACATCTGCCGGTTTCAACACCGATCAGCTTCCTCACACTCCGACCTCCGAGAACTACTCCGACGAAGACGAGGCCGCCGTCGATCCTCAAATCATACGAGATGAGCCAGATGAAGTGGAGGCAGAGGAAGAAGAGGAGGACGGAGAGGATCTCTTCAACGACAATTTCATGGACGATTACCGGAGAATGGACGAGCATGACGAGTATGAATCTTTGGGTCTTGATGACTCAATTGAGGATGAGAGAGATCTCGACCAGATCATGCAAGACAGAAGAGCTGCTGAGATAGAGCTTGATGCTCGAGAGGTTCGTCAAACTGATCGCAAGCTTCCTCAGCTACTTCATGATCATGACTCTGAGGATGGGAACTATAGGCCTTCGAAGAGGTCTAGAGCTAATTTCAGGCCTCTGGCTGGTGCAGGAAATAATGATGACATGAATGGAACACCAAGTTCACCTGGGAGATCACAAAGAGAACACTCTAGAGATGATGTGCCCATAACTGATCACTCACTTGATGAGCAGTATGAGGATGAAGATGATGATGAAGCTGAGTTTGAAATGTATCGTGTTCAAGGGGCACTAAGAGAATGGGTTACTAGGGATGAAGTTCGCCGTTTCATAGGCAGGAAGTTCAAGGATTTCTTACAGACATATGTAAACCCAAAGAATGGACGTGATGAGCTTGAATACATGCGTCTGATAAATGAGATGGTGCTAGATAATAAATGTAGCCTCGAGGTTGATTATAAACAGTTCATCTACGTACATCCAAATATTGCCATCTGGTTGGCTGACGCCCCACAATCTGTTCTAGAGGTCATGGAAGATGTAGCAAAGAAGATTGTATTTGAAATACATCCAAATTACAAAAACATCCATCAGAAGATTTTTGTAAGAATTACTAACTTACCAGTTTACGATCAGATTCGAAATATTAGACAGATCCATTTGAATACTATGATTCGCATTGGCGGAGTTGTGACTCGACGTTCTGGCGTATTTCCCCAGCTGCAACAAGTAAAGTATGATTGTAACAAGTGTGGGACAATATTGGGGCCATTCTTTCAGAATTCATATTCAGAAGTCAAGGTTGGATCTTGCCCCGAATGCCAATCAAAAGGGCCTTTCACTGTGAATGTTGAGCAGACAATATACCGGAACTACCAAAAGCTTACCCTCCAAGAGAGTCCTGGAATTGTGCCCGCAGGTCGGTTTCCTAGATACAAAGAAGTGATCCTTTTGAATGATCTGATTGATTGTGCCCGACCTGGAGAAGAGATCGAGGTCACTGGCATCTATTCAAATAACTTTGACTTATCTTTGAACACCAAAAATGGGTTTCCAGTATTTGCCACTGTAGTAGAAGCAAACTATGTTGCGAAGAAACAAGATCTATTTTCTGCTTACAAACTTACCCAAGAAGACAAAGAAGAAATTGAAAAGTTGTCTAAGGACCCAAGAATAGGAGAAAGGATTTTCAAGTCCATTGCACCATCAATCTATGGCCACGAGGATATAAAAACAGCCCTTGCACTTGCTATGTTTGGAGGCCAAGAGAAAAATGTCCAAGGGAAGCACAGGCTCCGAGGAGACATTAATATACTTCTTCTAGGTGATCCAGGAACAGCCAAGTCACAATTTCTAAAGTATGTTGAAAAGACAGGTCAGAGGGCTGTTTATACCACAGGTAAAGGAGCTTCTGCTGTAGGGCTAACAGCAGCAGTGCACAAGGACCCGGTCACAAGGGAGTGGACCCTCGAAGGAGGAGCCCTTGTTTTAGCAGATAAAGGAATATGTCTTATTGATGAGTTTGACAAGATGAATGATCAGGACAGGGTGAGTATCCACGAAGCAATGGAGCAGCAAAGCATTAGCATATCAAAGGCTGGGATTGTCACATCTCTCCAGGCACGTTGCTCTGTAATTGCTGCTGCCAATCCTATTGGAGGAAGATATGATTCCTCAAAAACGTTTTCCCAGAATGTTGAGTTGACAGATCCCATCCTCTCTCGCTTCGACATCCTTTGTGTGGTGAAGGATGTGGTAGACCCTGTAATAGACGAGATGCTTGCAACATTTGTTGTAGACAGTCATGCTAGATCCCAACCCAAGGGTGCTAATTTAGATAATAAGTCCATCGGTGAGTCTGAAGAAGATATGCAGGAGTCATTTAGGCCAGTTGATCCTGAGATACTTGATCAAAATTTGCTGAAGAAATACATAACATATGCTAAGTTGAACATTTTCCCAAGGTTGCATGATGTCGATATGGAGAAGCTCAAACAGGTTTATGCTGAACTACGTAGAGAATCATCTCATGGGCAAGGAGTTCCTATTGCAGTAAGACACATAGAGTCAATGATAAGAATGTCTGAAGCTCATGCAAGAATGCATCTAAGACAGCATGTCATACAAGACGATGTGGACATGGCAATTCGCGTGTTGCTTGATTCATTTATTTCAACACAAAAATTTGGTGTGCAGAAAGCTTTGAAATGGAAATTCAGTAGATATATGACATATAAGAAGGACCAAAACCGGTTTCTCCTCCATCTTCTTAGTGAGCTTAGGAACAATGCTCAACACTTTGAGAAAATTGTTACCGGTTCTCTTAGAGGGCTTACTCATATTGAAGTGAAAGTAGAGGATTTGCAAAGAAAGGCTCAGGAATATGAAATCTATGATGATCTGAAAGTCTTCTTCTCCAGCAACGACTTTACTTCGTCCAATTTTGAATTGGATGCAGACCGAGGAGTCATCAAGCACCCCCTAAGAGATGTTGAAATATAG 2853 42.97 MAGESADPNHGNPPSTPDSPTSAGFNTDQLPHTPTSENYSDEDEAAVDPQIIRDEPDEVEAEEEEEDGEDLFNDNFMDDYRRMDEHDEYESLGLDDSIEDERDLDQIMQDRRAAEIELDAREVRQTDRKLPQLLHDHDSEDGNYRPSKRSRANFRPLAGAGNNDDMNGTPSSPGRSQREHSRDDVPITDHSLDEQYEDEDDDEAEFEMYRVQGALREWVTRDEVRRFIGRKFKDFLQTYVNPKNGRDELEYMRLINEMVLDNKCSLEVDYKQFIYVHPNIAIWLADAPQSVLEVMEDVAKKIVFEIHPNYKNIHQKIFVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGTILGPFFQNSYSEVKVGSCPECQSKGPFTVNVEQTIYRNYQKLTLQESPGIVPAGRFPRYKEVILLNDLIDCARPGEEIEVTGIYSNNFDLSLNTKNGFPVFATVVEANYVAKKQDLFSAYKLTQEDKEEIEKLSKDPRIGERIFKSIAPSIYGHEDIKTALALAMFGGQEKNVQGKHRLRGDINILLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFSQNVELTDPILSRFDILCVVKDVVDPVIDEMLATFVVDSHARSQPKGANLDNKSIGESEEDMQESFRPVDPEILDQNLLKKYITYAKLNIFPRLHDVDMEKLKQVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVIQDDVDMAIRVLLDSFISTQKFGVQKALKWKFSRYMTYKKDQNRFLLHLLSELRNNAQHFEKIVTGSLRGLTHIEVKVEDLQRKAQEYEIYDDLKVFFSSNDFTSSNFELDADRGVIKHPLRDVEI 950
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 3200945 3206343 - Conep14aG0065100.1 Cone14ag0637 452486
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0637 950 Gene3D - 222 326 - -
Cone14ag0637 950 ProSitePatterns MCM family signature. 618 626 IPR018525 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0006260(InterPro)
Cone14ag0637 950 FunFam DNA helicase 357 407 - -
Cone14ag0637 950 Gene3D - 489 863 IPR027417 -
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein family signature 610 624 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein family signature 638 651 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein family signature 689 697 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein family signature 550 565 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein family signature 662 674 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 SMART mcm 326 841 IPR031327 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 MobiDBLite consensus disorder prediction 82 104 - -
Cone14ag0637 950 FunFam DNA helicase 489 863 - -
Cone14ag0637 950 Pfam MCM AAA-lid domain 757 840 IPR041562 -
Cone14ag0637 950 MobiDBLite consensus disorder prediction 118 148 - -
Cone14ag0637 950 MobiDBLite consensus disorder prediction 118 202 - -
Cone14ag0637 950 Coils Coil 895 915 - -
Cone14ag0637 950 ProSiteProfiles MCM family domain profile. 509 715 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
Cone14ag0637 950 MobiDBLite consensus disorder prediction 56 73 - -
Cone14ag0637 950 MobiDBLite consensus disorder prediction 176 192 - -
Cone14ag0637 950 Gene3D - 357 407 - -
Cone14ag0637 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 841 IPR027417 -
Cone14ag0637 950 SUPERFAMILY Nucleic acid-binding proteins 231 478 IPR012340 -
Cone14ag0637 950 Gene3D - 330 455 IPR012340 -
Cone14ag0637 950 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 221 907 IPR031327 GO:0000727(PANTHER)|GO:0003677(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006268(PANTHER)|GO:0017116(PANTHER)|GO:0032508(InterPro)|GO:0042555(PANTHER)|GO:0043138(PANTHER)|GO:1902975(PANTHER)
Cone14ag0637 950 FunFam DNA helicase 222 326 - -
Cone14ag0637 950 CDD MCM2 512 839 - -
Cone14ag0637 950 MobiDBLite consensus disorder prediction 1 51 - -
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 339 356 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 362 374 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 473 484 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 397 411 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Cone14ag0637 950 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 458 469 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Cone14ag0637 950 Pfam MCM OB domain 329 456 IPR033762 -
Cone14ag0637 950 Pfam Mini-chromosome maintenance protein 2 43 159 IPR008045 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006270(InterPro)|GO:0042555(InterPro)|GO:1905775(InterPro)
Cone14ag0637 950 MobiDBLite consensus disorder prediction 9 36 - -
Cone14ag0637 950 Pfam MCM N-terminal domain 230 323 IPR027925 -
Cone14ag0637 950 MobiDBLite consensus disorder prediction 56 75 - -
Cone14ag0637 950 Pfam MCM P-loop domain 497 719 IPR001208 GO:0003677(InterPro)|GO:0005524(InterPro)|GO:0032508(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0637 Cone-Chr14:3200945 Cone3ag1220 Cone-Chr3:30947681 2.78E-98 dispersed
Cone14ag0637 Cone-Chr14:3200945 Cone16ag0446 Cone-Chr16:6781760 8.61E-99 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0637 K02540 - vvi:100266163 1554.27