Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0667 ATGGGGTCGTGTCTCTCTGGCGACAACGCCAAGCCATCATCCTGTGCGCAGGACGATGAGACTGAGAGACTGTTTACGAGGAAGAGTGGCAGTTATAATAATTCAAGGAGGAAGATCATTCAGTCTTCTCCGTCTGCGTCTTCTTCTTCTTCTGATTCCAAGCTGGAGATGGTGCTGCATCGGATTCCTGGCCGGATGTTGTTGAATGGCTCCACAGATTCTGCTTCCCTTTTTACCAAGCAGGGCAAGAAAGGCGCTAATCAGGATGCTATGATTGTCTGGGAGAATTTTTGTTCAAAACAGAACTCGATTTTTTGTGGTGTCTTTGATGGCCATGGACCTAATGGCCATATGGTTGCAAGGAAAGTAAGAGATAGTCTTCCTTTGAAGTTAAATGCTCAGTGGGAATTAGATGCAACGACCACAACTGGGCTCACTGATGTAAACAGTAGTCCTATGGGTGATGGCGATCAGGGTAACCATTCAAACTTTTCTATCAAATTGAGAGAATCGTTGTTGAAGGCTTATAAGGTGATGGACAAAGAACTCAAACTGCATCCTTATCTCGATTGCTATTGCAGTGGGACAACGGCTGTTACACTGGTTAAACAGGGACATGATATTGTCATTGGAAATATTGGGGATTCAAGAGCTGTTTTAGGTACTAGAAATGAAGATGGCTCTCTTGTTGCAGTTCAATTGACTGAAGACCTCAAGCCAAATCTTCCAAAGGAAGCAGCACGGATCAAACGCTGTAAAGGACGGGTTTTTGCTCTCCAAAATGAGCCTGAGGTTGCTCGAGTTTGGTTGCCAAATTGTAATTCTCCTGGTCTTGCTATGGCCCGGGCTTTTGGAGATTTCTGCCTTAAAGGCTTTGGCTTGATCTCTGTTCCAGAAGTTTATCATCGCCATCTGACTGACGAGGATGAGTTTGTGGTGTTAGCTACAGATGGGGTCTGGGATGTTCTCTCAAACAAAGAAGTTGTAGACATAGTTGCATCTGCCTCGAGACCATATGCAGACTCGGACAAAGTTAGCATCCAGAATGAAAAGTGCAGTTACGAATCAGTGGTATCAGAGCAGCATTCAGGAGTTTCCGAGACATGTCACAAAAATTTGCCTCCTTGA 1128 44.77 MGSCLSGDNAKPSSCAQDDETERLFTRKSGSYNNSRRKIIQSSPSASSSSSDSKLEMVLHRIPGRMLLNGSTDSASLFTKQGKKGANQDAMIVWENFCSKQNSIFCGVFDGHGPNGHMVARKVRDSLPLKLNAQWELDATTTTGLTDVNSSPMGDGDQGNHSNFSIKLRESLLKAYKVMDKELKLHPYLDCYCSGTTAVTLVKQGHDIVIGNIGDSRAVLGTRNEDGSLVAVQLTEDLKPNLPKEAARIKRCKGRVFALQNEPEVARVWLPNCNSPGLAMARAFGDFCLKGFGLISVPEVYHRHLTDEDEFVVLATDGVWDVLSNKEVVDIVASASRPYADSDKVSIQNEKCSYESVVSEQHSGVSETCHKNLPP 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3439058 3442266 + Conep14aG0068200.1 Cone14ag0667 452516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0667 375 SUPERFAMILY PP2C-like 74 337 IPR036457 -
Cone14ag0667 375 MobiDBLite consensus disorder prediction 1 54 - -
Cone14ag0667 375 SMART PP2C_4 63 358 IPR001932 -
Cone14ag0667 375 ProSiteProfiles PPM-type phosphatase domain profile. 74 375 IPR001932 -
Cone14ag0667 375 CDD PP2Cc 74 334 IPR001932 -
Cone14ag0667 375 Gene3D - 69 372 IPR036457 -
Cone14ag0667 375 PANTHER PROTEIN PHOSPHATASE 56 339 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone14ag0667 375 MobiDBLite consensus disorder prediction 27 54 - -
Cone14ag0667 375 Pfam Protein phosphatase 2C 80 337 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0667 Cone-Chr14:3439058 Cone1ag1702 Cone-Chr1:57974327 2.14E-141 dispersed
Cone14ag0667 Cone-Chr14:3439058 Cone15ag0676 Cone-Chr15:3648238 4.09E-146 wgd
Cone14ag0667 Cone-Chr14:3439058 Cone17ag0390 Cone-Chr17:1857864 3.38E-18 wgd
Cone14ag0667 Cone-Chr14:3439058 Cone20ag1024 Cone-Chr20:7163667 3.72E-17 wgd
Cone14ag0667 Cone-Chr14:3439058 Cone4ag0057 Cone-Chr4:293560 8.51E-13 wgd
Cone14ag0667 Cone-Chr14:3439058 Cone7ag0053 Cone-Chr7:230820 1.52E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0667 - - - 0.0