Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0676 ATGGTGATCAAGAAAGGCAGTAAGGCCGAGAAAGAGAAGTTACAGACGGAGGAGACGACGGTGAAGAAGATTGAGAAGGGAATGCAACTAGGAAAGTATGAGCTGGGAAGGACGCTAGGAGAAGGAAATTTCGGAAAAGTTAAATTCGCTAAGAACATCGAGACTGGCCGGCCTTTCGCTGTTAAGATTCTCGAGAAGAGCAAAATCATCAACCTCAATATCATCGATCAGATCAAGAGGGAAATCGCTACACTGAAGCTCCTCAAACATCCAAACGTCGTCCGATTATACGAGGTTTTGGCCAGCAAAACCAAGATCTACATGGTCCTTGAGTATGTGAATGGTGGGGAACTGTTTGATAGAATAGCATCCAAGGGAAGACTATCAGAAGGTCAAGGAAGGAATCTCTTCCAACAGTTGATTGACGGAGTAAGCTACTGTCACAAAAAGGGTGTTTTCCACAGGGATCTCAAGCTAGAGAATGTACTTGTGGATGCCAAGGGGAAGATAAAGATATCAGATTTTGGCCTCAGTGCATTACCCCAACATTTTAGGGATGATGGGTTGCTTCATACAACCTGTGGAAGTCCCAACTACGTTGCACCAGAAATTCTTGCTAATAGAGGGTACGACGGTGCCACCTCAGACATATGGGCGTGTGGTGTCATATTGTACGTAGTTCTAACAGGAAATCTCCCTTTTGAGGACAGAAATCTTGTCGTTCTTTATCAGAAGATATTCAAAGGGGATGCGCCGATTCCAAAGCGACTATCCCCTGGGGCACAGAACCTGATAAGGAGGATTCTTGACCCCAATCCGAAAACTCGTATTACAATAGCTGGTATTAAAGCAGATGAATGGTTTAACCAGGACTATAATCCTTCTCCTCCCTGCCTTGATGATGAAGAATATCATGATCAATATCGAGATTCCTATGAGGATATACCCTTTGTCCAAGGATCAGATCATCTAGAGTCTGCCATCTCTCTGAATGATGGGGTGACAGAAGGGGAAAGGAGTCCAGAATCTTCCACTCTCATTAATGCCTTTCAGTTAATTGGAATGTCCTCATGCCTAGACCTTTCTGGCTTCTTTGAGAAGGAGGATGTCTCCGAGAGGAAGATCAGATTTACATCCAATCGCTCATCCAAATATCTGCTGGAGAGGATAGAAGATCTCGTAAAGGAGATGGGGTTTTGCGTCCATAAGAGAAACGGAAGGTTGAAAATGACACAAGGAGAGAACAAGGATCAAAAGATCAGCCCAGGAAGCCTCTTAGTCGCAGCAGAGGTATTTGAGATAAGCCCATCATTGTACGTCGTCGAACTAAGAAAATCGTATGGAGATTCATCAGTTTATAGACAGCTGTGTAAGAGGATATCAAATGATCTGAGCGTCCCTTCCAGCCAAGAGCTAGTTAGCAGTCCTAATTAA 1434 44.07 MVIKKGSKAEKEKLQTEETTVKKIEKGMQLGKYELGRTLGEGNFGKVKFAKNIETGRPFAVKILEKSKIINLNIIDQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDRIASKGRLSEGQGRNLFQQLIDGVSYCHKKGVFHRDLKLENVLVDAKGKIKISDFGLSALPQHFRDDGLLHTTCGSPNYVAPEILANRGYDGATSDIWACGVILYVVLTGNLPFEDRNLVVLYQKIFKGDAPIPKRLSPGAQNLIRRILDPNPKTRITIAGIKADEWFNQDYNPSPPCLDDEEYHDQYRDSYEDIPFVQGSDHLESAISLNDGVTEGERSPESSTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNRSSKYLLERIEDLVKEMGFCVHKRNGRLKMTQGENKDQKISPGSLLVAAEVFEISPSLYVVELRKSYGDSSVYRQLCKRISNDLSVPSSQELVSSPN 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3489720 3494147 + Conep14aG0069100.1 Cone14ag0676 452525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0676 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0676 477 FunFam Non-specific serine/threonine protein kinase 344 467 - -
Cone14ag0676 477 CDD CIPK_C 348 459 - -
Cone14ag0676 477 Gene3D Transferase(Phosphotransferase) domain 1 24 337 - -
Cone14ag0676 477 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 17 454 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone14ag0676 477 Gene3D Kinase associated domain 1, KA1 342 466 - -
Cone14ag0676 477 ProSiteProfiles Protein kinase domain profile. 33 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0676 477 SMART serkin_6 33 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0676 477 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524(InterPro)
Cone14ag0676 477 SUPERFAMILY Protein kinase-like (PK-like) 30 309 IPR011009 -
Cone14ag0676 477 FunFam Non-specific serine/threonine protein kinase 26 327 - -
Cone14ag0676 477 FunFam Non-specific serine/threonine protein kinase 24 112 - -
Cone14ag0676 477 ProSiteProfiles NAF domain profile. 342 366 IPR018451 GO:0007165(InterPro)
Cone14ag0676 477 Pfam NAF domain 345 403 IPR004041 GO:0007165(InterPro)
Cone14ag0676 477 Pfam Protein kinase domain 33 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0676 Cone-Chr14:3489720 Cone6ag1118 Cone-Chr6:7140717 3.33E-154 dispersed
Cone14ag0676 Cone-Chr14:3489720 Cone15ag0687 Cone-Chr15:3700415 2.87E-307 wgd
Cone14ag0676 Cone-Chr14:3489720 Cone4ag0084 Cone-Chr4:406201 9.15E-114 wgd
Cone14ag0676 Cone-Chr14:3489720 Cone7ag0077 Cone-Chr7:332438 4.41E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82091 PF04727 ELMO_CED12 6.80E-51 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0676 K07198 - cit:102613698 665.611