Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0709 ATGTCGTCTCATAACATGTACAATCATCATCTGATAGATCAGAAAGCATCGTCCTCTAATTATTTAGGGTTCGTGGATTTGTTGGGTATACAAGATTACACTCCATCTTTATTCGATGTGTTTTCTACTAATACTGCTACTACTTCTTCTACTTCTACTTCTTCTCTGCTCCCTCTGCCACCTCGGATGATGGCCGTGACGGCAGCTCAGCCACCTCTTCTTTCTCCGGCTTCCACGATGATGTCAGCTGATTCGGCAGAGGCGTTGAATGCTCCGGCCACGCCTAACTCTTCCTCGATCTCTTCATCATCAAATGAAGCAGCAAATACTAATAATGATCGTCATCAAGTACTTGTTAAGGGTGATGGGCATGAAGATAATGATAATATCCATAATCTTGAAGTGGATGATGAGACGGATCAAGAAAAAAATAAGAAACTATTGAAACCGAAAAAGAAGAACCAGAAAAGGCAAAGAGAGCCTAGAGTTGCTTTCATGACAAAGAGCGAGGTTGACCATCTAGACGACGGCTATAGATGGAGAAAGTACGGCCAAAAGGCTGTTAAAAACAGCCCTTTTCCCAGGAGTTATTATCGTTGCACGACGGCAGGTTGTGGAGTGAAGAAACGAGTGGAGAGATCGTCGGACGATTCCTCGATTGTTGTGACAACATATGAAGGACAACACACGCACCCGAGCCCAATAACTCCTCGAGGAAGCCTCCGGATCCTCCCCGATTCCACGAGTTTCGCAAATTTCCCACAACTTCAGTATCATCAACAACAACAACAACAGCAAGCTTATGGTAATATGCTATATAACTCCTCACCATCACTACAACCTCCTTGTTTCGATACTATTATAAGCTCATCAATCCCTACTAGGTTTAGCAATCCAAGTTTTGGAGCTAGTCATCATGATCATTCTATGCAAGATTTTTGTGATCATCATGGGCGTGCTAATTTTAGGGCACCTTCTTCTTCTTCTAATTTGGCTTCTAATAACTTTCTTATAAAAGATCATGGGCTCCTCGAAGACATTGTGCCATTACAGATGATAACTAGGAGGGAGCCTAAAGAGGAGTCCAAGTGA 1092 42.86 MSSHNMYNHHLIDQKASSSNYLGFVDLLGIQDYTPSLFDVFSTNTATTSSTSTSSLLPLPPRMMAVTAAQPPLLSPASTMMSADSAEALNAPATPNSSSISSSSNEAANTNNDRHQVLVKGDGHEDNDNIHNLEVDDETDQEKNKKLLKPKKKNQKRQREPRVAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTAGCGVKKRVERSSDDSSIVVTTYEGQHTHPSPITPRGSLRILPDSTSFANFPQLQYHQQQQQQQAYGNMLYNSSPSLQPPCFDTIISSSIPTRFSNPSFGASHHDHSMQDFCDHHGRANFRAPSSSSNLASNNFLIKDHGLLEDIVPLQMITRREPKEESK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3846357 3848429 - Conep14aG0072500.1 Cone14ag0709 452558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0709 363 SMART WRKY_cls 174 233 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0709 363 Gene3D WRKY domain 159 235 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0709 363 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 252 IPR044810 GO:0003700(InterPro)
Cone14ag0709 363 MobiDBLite consensus disorder prediction 89 161 - -
Cone14ag0709 363 ProSiteProfiles WRKY domain profile. 169 234 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0709 363 MobiDBLite consensus disorder prediction 117 147 - -
Cone14ag0709 363 Pfam WRKY DNA -binding domain 175 232 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0709 363 FunFam WRKY transcription factor 57 160 234 - -
Cone14ag0709 363 SUPERFAMILY WRKY DNA-binding domain 166 234 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cone14ag0709 363 MobiDBLite consensus disorder prediction 89 116 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0709 Cone-Chr14:3846357 Cone5ag1608 Cone-Chr5:11290360 3.18E-41 dispersed
Cone14ag0709 Cone-Chr14:3846357 Cone15ag0722 Cone-Chr15:4027841 4.07E-173 wgd
Cone14ag0709 Cone-Chr14:3846357 Cone17ag0402 Cone-Chr17:1912244 5.80E-47 wgd
Cone14ag0709 Cone-Chr14:3846357 Cone18ag0755 Cone-Chr18:4193975 5.63E-45 wgd
Cone14ag0709 Cone-Chr14:3846357 Cone20ag1011 Cone-Chr20:7094584 4.24E-41 wgd
Cone14ag0709 Cone-Chr14:3846357 Cone4ag0098 Cone-Chr4:473724 3.68E-47 wgd
Cone14ag0709 Cone-Chr14:3846357 Cone7ag0093 Cone-Chr7:409523 2.50E-41 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44764 PF03987 Autophagy_act_C 7.20E-55 CL0097 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0709 - - - 0.0