Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0710 ATGGCGTCATCTCTGGTTTCCAATCCCGTAATGAATCCTGACCGTTCGCGCGATTCTTCCAGAAGGAAAAAGAAGAAGAAAATTCAGTCACAGATAGATGATCATCAAAATCAGAATCATCAGCATAACAAATGGAAATCTGATGCTCAGCAGCAAATCTATTCGTCCAAGCTAATCCAAGCCTTGAGCCAAGTCAGGATCGGTTCCACCGCCTCATCCAGCTCCTCGGCTTTGGCTCATAACGAGACACCGCGCCGTGGCCGAGCCGTCCGTGAGGCTGCTGATAGAGTCCTAGCCGTGGCGGCGAAGGGGAGAACTAGGTGGAGCCGAGCGATCTTGACGAATCGGCTTAAGCTTAAGTTTATGAAGCATAAGCGGCAGAGAGTTACTGCCCCTGGGAATTTCCGGTCAAAGAAGCCGAGAGTGGGCGTTCTACGGTTGAAAGGCAAATCTCTACCGGCTGTGCAGAGGAAAGTTCGCGTCCTCGGAAGGTTGGTTCCCGGTTGCCGGAAACAACCGCTGCCGGTGATTCTAGACGAGGCTACTGATTATATAGCCGCGCTTGAGATGCAGATTCGAGCCATGAGTGCCGTCGCTGAGCTGCTCTCTGGCGCCGGCTCTAGCTCAGCTCCGCCCCGCCCAGTTGATGGCGTTTGCCACATGTAA 666 53.3 MASSLVSNPVMNPDRSRDSSRRKKKKKIQSQIDDHQNQNHQHNKWKSDAQQQIYSSKLIQALSQVRIGSTASSSSSALAHNETPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFMKHKRQRVTAPGNFRSKKPRVGVLRLKGKSLPAVQRKVRVLGRLVPGCRKQPLPVILDEATDYIAALEMQIRAMSAVAELLSGAGSSSAPPRPVDGVCHM 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3874108 3875173 - Conep14aG0072600.1 Cone14ag0710 452559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0710 221 CDD bHLH_AtIBH1_like 144 197 IPR044549 GO:0006355(InterPro)
Cone14ag0710 221 MobiDBLite consensus disorder prediction 27 42 - -
Cone14ag0710 221 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 202 IPR044660 GO:0006355(InterPro)
Cone14ag0710 221 MobiDBLite consensus disorder prediction 1 49 - -
Cone14ag0710 221 MobiDBLite consensus disorder prediction 70 90 - -
Cone14ag0710 221 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 204 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0710 Cone-Chr14:3874108 Cone1ag1557 Cone-Chr1:57413133 2.95E-43 dispersed
Cone10ag0823 Cone-Chr10:4186969 Cone14ag0710 Cone-Chr14:3874108 2.56E-39 wgd
Cone14ag0710 Cone-Chr14:3874108 Cone15ag0723 Cone-Chr15:4086223 8.13E-108 wgd
Cone14ag0710 Cone-Chr14:3874108 Cone3ag0849 Cone-Chr3:4369602 1.36E-39 wgd
Cone14ag0710 Cone-Chr14:3874108 Cone4ag0100 Cone-Chr4:482564 1.01E-64 wgd
Cone14ag0710 Cone-Chr14:3874108 Cone7ag0095 Cone-Chr7:417925 1.25E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0710 - - - 0.0