Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0714 ATGCTCGAGGCATTGATGAATCTTCTCTCTGTTTGTTGGAAGCCGTTCGGGCATGGCGATGAGGTAGACTCTTCTACTTCTGTCGGAGTTATCGGAGCCAATTCCGGTGGTGGTGGTGGTGGTGGCGGAGGCGGCGGTAGGAGAGACGGTTTGTATTGGTTCCATGATATCGGAAAGTATGCTTCCGGTGAATTCTCCATGGCGGTTGTGCAGGCAAACCAGGTGCTTGAGGACCATAGCCAGATCGAATCTGGGCCGTTTGGCACCTTTGTTGGCGTCTATGATGGCCATGGTGGCTCAGAGGCTGCTCGATACGTTTGTGATAACTTGTTCAGGCATTTTCAAGTGGGGGGTTTTTTTCCCTGTGCAGAATTATCAGCTGAGGCGCATGCCCTTGTGACGTCCGGTACAATTGAAAGAGCCTTTCACCAGACGGAAGAAGGGTTCACTGCCCTAGTGTCGGAATTGTGGAGCACTCGACCCCAAATAGCAACTGTTGGATCTTGCTGTTTAGTTGGAGTGATCTGTCAGCAAACCCTCTACATTGCGAACCTTGGAGATTCTCGAGTAGTATTAGGCAAGAAAGTTGGAAATACTGGTGAGATTGCTGCTATTCAGTTATCAACTGAACATAATGCAAATAGTGAAGCTGTTAGGCAGGACCTAAAAGAAGAGCACCCAAATGATCCTCAAGTTGTTGTCCAAAGGCATGGTGTTTGGAGAGTTAAAGGCATTATACAGGTTTCTAGATCTATAGGCGATGTCTATCTGAAACATGCACAGTATAATACTGAACGGATTAACAGCAAATTCAGAATTTCTGAACCTATGGATATGCCTATCTTGTCTGCCATTCCAACTATTCTTTCTCATCCTCTCAATCCAAATGATTCTTTCCTTATTTTTGCATCTGATGGTCTATGGGAACACTTGAGTAATGAGAAGGCGGTGGATATTGTCCATAATAATCCACATGCAGGAAGTGCAAAAAGGCTTGTGAAGGCTGCCCTCCAAGAAGCAGCAAGAAAACGAGAAATGAGATATTCAGACCTCAGAAAAATTGACAAGAAGGTTAGACGCCATTTCCATGACGATATAACTGTTATTGTTTTATTCTTAAACCACGACCTTTTATCCCGAGCCATTACTCTAGACCAACCCTTGTCAATTCGAACTACTCTCAGTCACTACTGA 1194 45.06 MLEALMNLLSVCWKPFGHGDEVDSSTSVGVIGANSGGGGGGGGGGGRRDGLYWFHDIGKYASGEFSMAVVQANQVLEDHSQIESGPFGTFVGVYDGHGGSEAARYVCDNLFRHFQVGGFFPCAELSAEAHALVTSGTIERAFHQTEEGFTALVSELWSTRPQIATVGSCCLVGVICQQTLYIANLGDSRVVLGKKVGNTGEIAAIQLSTEHNANSEAVRQDLKEEHPNDPQVVVQRHGVWRVKGIIQVSRSIGDVYLKHAQYNTERINSKFRISEPMDMPILSAIPTILSHPLNPNDSFLIFASDGLWEHLSNEKAVDIVHNNPHAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLLSRAITLDQPLSIRTTLSHY 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3900353 3903953 - Conep14aG0073000.1 Cone14ag0714 452563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0714 397 CDD PP2Cc 65 373 IPR001932 -
Cone14ag0714 397 Gene3D - 56 382 IPR036457 -
Cone14ag0714 397 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169(InterPro)
Cone14ag0714 397 SMART PP2C_4 58 371 IPR001932 -
Cone14ag0714 397 Pfam Protein phosphatase 2C 89 341 IPR001932 -
Cone14ag0714 397 ProSiteProfiles PPM-type phosphatase domain profile. 61 373 IPR001932 -
Cone14ag0714 397 FunFam Probable protein phosphatase 2C 42 55 381 - -
Cone14ag0714 397 PANTHER PROTEIN PHOSPHATASE 62 372 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone14ag0714 397 SUPERFAMILY PP2C-like 73 374 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0714 Cone-Chr14:3900353 Cone8ag0870 Cone-Chr8:8576582 1.04E-141 dispersed
Cone14ag0714 Cone-Chr14:3900353 Cone15ag0726 Cone-Chr15:4129871 1.12E-202 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0714 K01102 - mdm:103434226 593.578