Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone14ag0716 | ATGGAAACTCCACCGGCCGAGGAGCTTTTGAGGAAGATCCAAGACCTGGAAGCAGGTCACGCTCATCTCAAGCAAGAGATGACAAAGCTAATGCTATCTGGCGGCGGCGCTTCTACGGGCTCCATGAACGACCGGCAACCTCACCATCACCATAACTACCACTACCATCATAGGTCGCAATCAATTTCACCTCAACGCTCGAGATTGGCTGTGTCGAGGAGGAAGAGTGGGGGATTAGAAGGAGCTACTGCTGCGGCGGCGTGGAAGAAAGGTTCAACTTCGTTTCGACATTCTTCTCCGCTTCAGAGGGAGAGTCGGAGCCACGATCCTTCAAATGCTGGAAATGGAGTAGAAAGTAGCGGCGGCGGCGGAGGAGGAGGTGGTAGTGGTGGTGATTGTACTCCTTCAGCTTTGAATCTTACTCATAAGCAATATTTGAATATCTTGCAGTCAATGGGACAGTCTATTCATATATTTGATCTTACTGGCCGTATAATTTACTGGAACCGAACTGCTGAAAAAACATATGGTTATTCTGCAGCAGAGGCTCTTGGCCAGGATGCTTTTGAGCTTCTGTTAGATCCTCGAGACCATGGCATTGCAAACGATATAATAAATCGGGTTACAATGGGGGAGAGCTGGACAGGGCAGTTCTCAGTCAAGCATAAAATGGGCAATAGTTTTTTAGTTGTTGCAACCGACACTCCCTTCTATGATGATGACGATGCTTTGATTGGAATTATCTGTGTTTCGAGTGATTCACAGCCCTATCAAGAAATGAGGGCTGCATTGTCAAGTGGTAAGAACCCAGAACCATGTTCAAGCTCTAGCCGATCTGCTAGTGTTACGACTAAACTTGGTCTCGATCCTCAACAGCCTCTGCAAGTTGCAATTGCTTCGAAAATATCAAATTTGGCCTCAAGGGTAAGCAACAAAGTTAAGTCAAGGATTCGAACCGGAGAAAATAGCTTTGATCGTGAGGGTGGAAGTGGGGATAGTCATCATTCTGAGCATGGCTTTTCAGATGCAATTCTATCTGATCATAGGGAGGATGCAAATTCAAGTGGAGCTAGCACTCCGAGAGGAGATATACCCCCTTCTCCTTTTGGTGTATTTTCAAATATTGAAGAGAAATCCCCTGGAAAAAATTTCCGGGATTCTGGTGACGAGGGTGAAGGAAAGCCTGCAATTCACAAGATAATAAGTTCAAAGGCAGAAGCATGGATTAGTAAGAAAGGCTTATCATGGCCATGGAAAGGGAACGAACGAGAAGGGTCAGAGGCAAGGACTGCTCGGTTTCTCTGGCCATGGCTGCATAATGATCAAGAGATGGAGTCAATTAATCAAAGGAGTTCCTCTTTGGGCATGAGTTCCATGATGCCGGAAATGCAAGCTAATGAAAGCAGTAGACCCATAAATGATGCATCTGGGTCTTGGTCTTCATTTAATGTTAACAGCACAAGTAGTGCTAGTAGCGGCGGAAGTACTACCAGTAGCACTGCTAACAAGGTTGACATGGACACAGACTGCTTAGATTATGAAATCTTGTGGGAAGACTTGACGATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGGTTTGTGGAATGGATCGGATGTTGCTGTCAAAGTATTTTCCAGACAAGAATATTCGGACGATATGATACTCTCCTTCAGACAAGAGGTATCTCTTATGAAAAAACTCCGGCACCCAAATATTCTGCTTTTCATGGGAGTTGTAACTTCCCGTCAACGTCTATGTATAGTTACGGAGTTCCTTCCTCGTGGGAGTTTGTTCCGTTTACTACAAAGGAACACTACCAAACTAGATTGGAGACGGCGAATTCATATGACTTTGGATATAGCACGGGGAATGAATTATCTACATCGTTGCAATCCACCTATCATTCATCGAGATTTGAAGTCCTCAAATCTCCTAGTCGACAGAAATTGGACTGTTAAGGTTGGAGATTTTGGTCTATCTCGTCTCAAGCACGACACTTTTCTCACAACCAAGACTGGGAAGGGAACGCCTCAGTGGATGGCACCTGAAGTTCTTCGAAATGAACCCTCAGATGAGAAGTCTGACATATATAGCTTTGGAGTCATATTGTGGGAGCTTGCCACTGAGAAGATCCCTTGGGATAATCTCAATTCTATGCAGGTGATTGGTGCTGTAGGGTTTATGGACCAACGACTTGAAATCCCGACGGATATGGATCCACTGTGGGTTTCTATAATCGAGAGCTGCTGGCACAGTGAGCCCGCACGCAGGCCAACATTCCAGGAATTGATAGAAAAGCTTAGAGAGTTGCAGAGGAAGTACGCGATTCAGTTACAAGCCGCTCGTTCCAGTGCTGGAGATACCAACTCTCAAAGGGAATTGTAG | 2400 | 45.33 | METPPAEELLRKIQDLEAGHAHLKQEMTKLMLSGGGASTGSMNDRQPHHHHNYHYHHRSQSISPQRSRLAVSRRKSGGLEGATAAAAWKKGSTSFRHSSPLQRESRSHDPSNAGNGVESSGGGGGGGGSGGDCTPSALNLTHKQYLNILQSMGQSIHIFDLTGRIIYWNRTAEKTYGYSAAEALGQDAFELLLDPRDHGIANDIINRVTMGESWTGQFSVKHKMGNSFLVVATDTPFYDDDDALIGIICVSSDSQPYQEMRAALSSGKNPEPCSSSSRSASVTTKLGLDPQQPLQVAIASKISNLASRVSNKVKSRIRTGENSFDREGGSGDSHHSEHGFSDAILSDHREDANSSGASTPRGDIPPSPFGVFSNIEEKSPGKNFRDSGDEGEGKPAIHKIISSKAEAWISKKGLSWPWKGNEREGSEARTARFLWPWLHNDQEMESINQRSSSLGMSSMMPEMQANESSRPINDASGSWSSFNVNSTSSASSGGSTTSSTANKVDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHGLWNGSDVAVKVFSRQEYSDDMILSFRQEVSLMKKLRHPNILLFMGVVTSRQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRIHMTLDIARGMNYLHRCNPPIIHRDLKSSNLLVDRNWTVKVGDFGLSRLKHDTFLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWDNLNSMQVIGAVGFMDQRLEIPTDMDPLWVSIIESCWHSEPARRPTFQELIEKLRELQRKYAIQLQAARSSAGDTNSQREL | 799 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 3916480 | 3922248 | - | Conep14aG0073200.1 | Cone14ag0716 | 452565 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone14ag0716 | 799 | SMART | serkin_6 | 520 | 780 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | NCBIfam | PAS domain S-box protein | 143 | 260 | IPR000014 | - | |
Cone14ag0716 | 799 | SMART | pas_2 | 143 | 210 | IPR000014 | - | |
Cone14ag0716 | 799 | FunFam | PAS domain-containing protein tyrosine kinase family protein | 598 | 789 | - | - | |
Cone14ag0716 | 799 | MobiDBLite | consensus disorder prediction | 32 | 131 | - | - | |
Cone14ag0716 | 799 | Gene3D | Transferase(Phosphotransferase) domain 1 | 598 | 798 | - | - | |
Cone14ag0716 | 799 | MobiDBLite | consensus disorder prediction | 263 | 287 | - | - | |
Cone14ag0716 | 799 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 110 | 775 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone14ag0716 | 799 | CDD | STKc_MAP3K-like | 526 | 772 | - | - | |
Cone14ag0716 | 799 | Coils | Coil | 765 | 785 | - | - | |
Cone14ag0716 | 799 | CDD | PAS | 152 | 253 | IPR000014 | - | |
Cone14ag0716 | 799 | ProSiteProfiles | Protein kinase domain profile. | 520 | 780 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | Coils | Coil | 6 | 26 | - | - | |
Cone14ag0716 | 799 | Gene3D | Phosphorylase Kinase; domain 1 | 513 | 597 | - | - | |
Cone14ag0716 | 799 | Pfam | PAS fold | 144 | 251 | IPR013767 | GO:0006355(InterPro) | |
Cone14ag0716 | 799 | ProSiteProfiles | PAS repeat profile. | 141 | 212 | IPR000014 | - | |
Cone14ag0716 | 799 | Gene3D | PAS domain | 153 | 259 | - | - | |
Cone14ag0716 | 799 | MobiDBLite | consensus disorder prediction | 92 | 118 | - | - | |
Cone14ag0716 | 799 | MobiDBLite | consensus disorder prediction | 314 | 349 | - | - | |
Cone14ag0716 | 799 | Pfam | Protein tyrosine and serine/threonine kinase | 520 | 772 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | SUPERFAMILY | Protein kinase-like (PK-like) | 507 | 771 | IPR011009 | - | |
Cone14ag0716 | 799 | MobiDBLite | consensus disorder prediction | 379 | 394 | - | - | |
Cone14ag0716 | 799 | FunFam | PAS domain-containing protein tyrosine kinase | 513 | 597 | - | - | |
Cone14ag0716 | 799 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 639 | 651 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | PRINTS | Tyrosine kinase catalytic domain signature | 743 | 765 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | PRINTS | Tyrosine kinase catalytic domain signature | 680 | 690 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | PRINTS | Tyrosine kinase catalytic domain signature | 594 | 607 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | PRINTS | Tyrosine kinase catalytic domain signature | 699 | 721 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | PRINTS | Tyrosine kinase catalytic domain signature | 633 | 651 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone14ag0716 | 799 | MobiDBLite | consensus disorder prediction | 310 | 394 | - | - | |
Cone14ag0716 | 799 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 147 | 250 | IPR035965 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0716 | Cone-Chr14:3916480 | Cone19ag0331 | Cone-Chr19:2671450 | 4.47E-106 | dispersed | |
Cone8ag0327 | Cone-Chr8:1876727 | Cone14ag0716 | Cone-Chr14:3916480 | 2.47E-131 | transposed | |
Cone14ag0716 | Cone-Chr14:3916480 | Cone15ag0728 | Cone-Chr15:4150184 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82092 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone14ag0716 | - | - | - | 0.0 |