Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0716 ATGGAAACTCCACCGGCCGAGGAGCTTTTGAGGAAGATCCAAGACCTGGAAGCAGGTCACGCTCATCTCAAGCAAGAGATGACAAAGCTAATGCTATCTGGCGGCGGCGCTTCTACGGGCTCCATGAACGACCGGCAACCTCACCATCACCATAACTACCACTACCATCATAGGTCGCAATCAATTTCACCTCAACGCTCGAGATTGGCTGTGTCGAGGAGGAAGAGTGGGGGATTAGAAGGAGCTACTGCTGCGGCGGCGTGGAAGAAAGGTTCAACTTCGTTTCGACATTCTTCTCCGCTTCAGAGGGAGAGTCGGAGCCACGATCCTTCAAATGCTGGAAATGGAGTAGAAAGTAGCGGCGGCGGCGGAGGAGGAGGTGGTAGTGGTGGTGATTGTACTCCTTCAGCTTTGAATCTTACTCATAAGCAATATTTGAATATCTTGCAGTCAATGGGACAGTCTATTCATATATTTGATCTTACTGGCCGTATAATTTACTGGAACCGAACTGCTGAAAAAACATATGGTTATTCTGCAGCAGAGGCTCTTGGCCAGGATGCTTTTGAGCTTCTGTTAGATCCTCGAGACCATGGCATTGCAAACGATATAATAAATCGGGTTACAATGGGGGAGAGCTGGACAGGGCAGTTCTCAGTCAAGCATAAAATGGGCAATAGTTTTTTAGTTGTTGCAACCGACACTCCCTTCTATGATGATGACGATGCTTTGATTGGAATTATCTGTGTTTCGAGTGATTCACAGCCCTATCAAGAAATGAGGGCTGCATTGTCAAGTGGTAAGAACCCAGAACCATGTTCAAGCTCTAGCCGATCTGCTAGTGTTACGACTAAACTTGGTCTCGATCCTCAACAGCCTCTGCAAGTTGCAATTGCTTCGAAAATATCAAATTTGGCCTCAAGGGTAAGCAACAAAGTTAAGTCAAGGATTCGAACCGGAGAAAATAGCTTTGATCGTGAGGGTGGAAGTGGGGATAGTCATCATTCTGAGCATGGCTTTTCAGATGCAATTCTATCTGATCATAGGGAGGATGCAAATTCAAGTGGAGCTAGCACTCCGAGAGGAGATATACCCCCTTCTCCTTTTGGTGTATTTTCAAATATTGAAGAGAAATCCCCTGGAAAAAATTTCCGGGATTCTGGTGACGAGGGTGAAGGAAAGCCTGCAATTCACAAGATAATAAGTTCAAAGGCAGAAGCATGGATTAGTAAGAAAGGCTTATCATGGCCATGGAAAGGGAACGAACGAGAAGGGTCAGAGGCAAGGACTGCTCGGTTTCTCTGGCCATGGCTGCATAATGATCAAGAGATGGAGTCAATTAATCAAAGGAGTTCCTCTTTGGGCATGAGTTCCATGATGCCGGAAATGCAAGCTAATGAAAGCAGTAGACCCATAAATGATGCATCTGGGTCTTGGTCTTCATTTAATGTTAACAGCACAAGTAGTGCTAGTAGCGGCGGAAGTACTACCAGTAGCACTGCTAACAAGGTTGACATGGACACAGACTGCTTAGATTATGAAATCTTGTGGGAAGACTTGACGATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGGTTTGTGGAATGGATCGGATGTTGCTGTCAAAGTATTTTCCAGACAAGAATATTCGGACGATATGATACTCTCCTTCAGACAAGAGGTATCTCTTATGAAAAAACTCCGGCACCCAAATATTCTGCTTTTCATGGGAGTTGTAACTTCCCGTCAACGTCTATGTATAGTTACGGAGTTCCTTCCTCGTGGGAGTTTGTTCCGTTTACTACAAAGGAACACTACCAAACTAGATTGGAGACGGCGAATTCATATGACTTTGGATATAGCACGGGGAATGAATTATCTACATCGTTGCAATCCACCTATCATTCATCGAGATTTGAAGTCCTCAAATCTCCTAGTCGACAGAAATTGGACTGTTAAGGTTGGAGATTTTGGTCTATCTCGTCTCAAGCACGACACTTTTCTCACAACCAAGACTGGGAAGGGAACGCCTCAGTGGATGGCACCTGAAGTTCTTCGAAATGAACCCTCAGATGAGAAGTCTGACATATATAGCTTTGGAGTCATATTGTGGGAGCTTGCCACTGAGAAGATCCCTTGGGATAATCTCAATTCTATGCAGGTGATTGGTGCTGTAGGGTTTATGGACCAACGACTTGAAATCCCGACGGATATGGATCCACTGTGGGTTTCTATAATCGAGAGCTGCTGGCACAGTGAGCCCGCACGCAGGCCAACATTCCAGGAATTGATAGAAAAGCTTAGAGAGTTGCAGAGGAAGTACGCGATTCAGTTACAAGCCGCTCGTTCCAGTGCTGGAGATACCAACTCTCAAAGGGAATTGTAG 2400 45.33 METPPAEELLRKIQDLEAGHAHLKQEMTKLMLSGGGASTGSMNDRQPHHHHNYHYHHRSQSISPQRSRLAVSRRKSGGLEGATAAAAWKKGSTSFRHSSPLQRESRSHDPSNAGNGVESSGGGGGGGGSGGDCTPSALNLTHKQYLNILQSMGQSIHIFDLTGRIIYWNRTAEKTYGYSAAEALGQDAFELLLDPRDHGIANDIINRVTMGESWTGQFSVKHKMGNSFLVVATDTPFYDDDDALIGIICVSSDSQPYQEMRAALSSGKNPEPCSSSSRSASVTTKLGLDPQQPLQVAIASKISNLASRVSNKVKSRIRTGENSFDREGGSGDSHHSEHGFSDAILSDHREDANSSGASTPRGDIPPSPFGVFSNIEEKSPGKNFRDSGDEGEGKPAIHKIISSKAEAWISKKGLSWPWKGNEREGSEARTARFLWPWLHNDQEMESINQRSSSLGMSSMMPEMQANESSRPINDASGSWSSFNVNSTSSASSGGSTTSSTANKVDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHGLWNGSDVAVKVFSRQEYSDDMILSFRQEVSLMKKLRHPNILLFMGVVTSRQRLCIVTEFLPRGSLFRLLQRNTTKLDWRRRIHMTLDIARGMNYLHRCNPPIIHRDLKSSNLLVDRNWTVKVGDFGLSRLKHDTFLTTKTGKGTPQWMAPEVLRNEPSDEKSDIYSFGVILWELATEKIPWDNLNSMQVIGAVGFMDQRLEIPTDMDPLWVSIIESCWHSEPARRPTFQELIEKLRELQRKYAIQLQAARSSAGDTNSQREL 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3916480 3922248 - Conep14aG0073200.1 Cone14ag0716 452565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0716 799 SMART serkin_6 520 780 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 NCBIfam PAS domain S-box protein 143 260 IPR000014 -
Cone14ag0716 799 SMART pas_2 143 210 IPR000014 -
Cone14ag0716 799 FunFam PAS domain-containing protein tyrosine kinase family protein 598 789 - -
Cone14ag0716 799 MobiDBLite consensus disorder prediction 32 131 - -
Cone14ag0716 799 Gene3D Transferase(Phosphotransferase) domain 1 598 798 - -
Cone14ag0716 799 MobiDBLite consensus disorder prediction 263 287 - -
Cone14ag0716 799 PANTHER SERINE-THREONINE PROTEIN KINASE 110 775 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone14ag0716 799 CDD STKc_MAP3K-like 526 772 - -
Cone14ag0716 799 Coils Coil 765 785 - -
Cone14ag0716 799 CDD PAS 152 253 IPR000014 -
Cone14ag0716 799 ProSiteProfiles Protein kinase domain profile. 520 780 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 Coils Coil 6 26 - -
Cone14ag0716 799 Gene3D Phosphorylase Kinase; domain 1 513 597 - -
Cone14ag0716 799 Pfam PAS fold 144 251 IPR013767 GO:0006355(InterPro)
Cone14ag0716 799 ProSiteProfiles PAS repeat profile. 141 212 IPR000014 -
Cone14ag0716 799 Gene3D PAS domain 153 259 - -
Cone14ag0716 799 MobiDBLite consensus disorder prediction 92 118 - -
Cone14ag0716 799 MobiDBLite consensus disorder prediction 314 349 - -
Cone14ag0716 799 Pfam Protein tyrosine and serine/threonine kinase 520 772 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 SUPERFAMILY Protein kinase-like (PK-like) 507 771 IPR011009 -
Cone14ag0716 799 MobiDBLite consensus disorder prediction 379 394 - -
Cone14ag0716 799 FunFam PAS domain-containing protein tyrosine kinase 513 597 - -
Cone14ag0716 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 PRINTS Tyrosine kinase catalytic domain signature 743 765 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 PRINTS Tyrosine kinase catalytic domain signature 680 690 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 PRINTS Tyrosine kinase catalytic domain signature 594 607 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 PRINTS Tyrosine kinase catalytic domain signature 699 721 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 PRINTS Tyrosine kinase catalytic domain signature 633 651 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0716 799 MobiDBLite consensus disorder prediction 310 394 - -
Cone14ag0716 799 SUPERFAMILY PYP-like sensor domain (PAS domain) 147 250 IPR035965 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0716 Cone-Chr14:3916480 Cone19ag0331 Cone-Chr19:2671450 4.47E-106 dispersed
Cone8ag0327 Cone-Chr8:1876727 Cone14ag0716 Cone-Chr14:3916480 2.47E-131 transposed
Cone14ag0716 Cone-Chr14:3916480 Cone15ag0728 Cone-Chr15:4150184 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82092 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0716 - - - 0.0