Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone14ag0727 | ATGGAGGAAGCAAGATCGAGATGGCTCCGTCCAAATGAGATTCATGCAATTCTTTGTAATTACAAGCATTTCAGCATCCATGTTAAGCCAGTTAACTTGCCCAAAAGTGGAACCATTGTGTTATTTGATCGGAAGATGCTTAGAAACTTCAGGAAAGATGGTCATAACTGGAAGAAGAAAAAGGATGGGAAGACTGTTAAAGAAGCACATGAACACCTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGATAACACAACCTTCGTCCGGAGATGTTACTGGCTACTTGATAAGAGTCTAGAACACATAGTCCTGGTCCATTATCGTGAAACACGAGAGTTGCAAGGTTCTCCAGCCACACCCGTGAATTCTAGTTCTACTTCAGCCTCTGACCCATCTCCTCCCTGGCTTTTATCTGAAGAACTTGACTCTGGGACTGATCATGCTTATCATCTTGGCGAGAAAGAACTTCTAGATCCTGGTGATAGTATAACTGTCCAGAATCATGAAAAGAGGCTTCATGAGATTAACACACTTGATTGGGATGAGCTTCTTATGAACCCAACTATGCTTATAGAAGACCAACTTTTTAGCAATGATCAACAGAATCACAATGCGATAAATGGGTCCCTAACAAATGTTGCTGATAATTTACTGGCTGAAATTTGTCCATTTGATAGTCCAACTGAACCAATTGGAATCAATAGCAGTCATTTGTCAGAGAGTGTCTATATTCCAACAATGGGCGATCAAGTAAATTCAAATGCGCAGACAATAGAATACACTTCCACTTCCCAAAATATTGCCTATTCCTCAAACATTTTGGTTAATGAGAGATTGCAAGGTCAGGACAGTTTTGGACAGTGGATAACCCAGATTATCACTGATTCTCCCGATTCAGCAAATGATACTGGTTTTGGGTCCTCGATTACAACTATTCAGGACACACTTCTCTCTGCTTCAATAGATCATCACCAACCTTTTGTTCCAGAACAAATATTTACCATAAATGAAATTTCACCAGCATGGGCTTTTGCATCAGAGAAAACCAAGATTCTAGTCACTGGATTTTTTCATCAAGAGTTCCTTCACCTGGAAAAGTCAAAAATGTTGTGCATCTGTGATGGTATCTCAATTCCTGCAGAAATGGTTCAATCTGGAGTATATCGCTTAGTTGTGCCATCACATTCCCGAGGATTAGTAAATCTGTATATGAGTATAGACGGTCTTAAGCCCATCAGTCAAGTTCTGAATTTCGAGTATTGCACACCATTATTGCATGACCCAATAGTTTCTGCAGAAGAGAAGGACAAGTGGAACGAGTTCCAAGTTCAAATGCGGCTGGTCTATCTGCTCTTCTCGAATTCTAAGACCCTTGACATTCTATCTAATAAGGTATCACCAAATTCACTTAAGGATGCAAAGAAGTTCGCTCTCAAAACCTCAAACATTTCTAAAAGCTGGACTTATTTCATCAAGTCAATTGAAGAGAATAGAACTCCATTTCCTCCAGCAAAAGATGGTCTGTTTGAACTTATTTTGAAGAACAGACTGAGAGAATGGTTGCTGGAAAGAGTTGTCGAAGGCTCCAAGAAGAGCTCCGAATTTGATGGGCATGGTCAAGGAGTAATACATTTATGTGCTATTTTGGGATATACGTGGGCTATATGTTTGTTTGCTTGGTCCGGTCTATCCCTGGATTTTCGGGACAAGCATGGATGGTCAGCTCTTCACTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGGAGTTCTCTTATCTGCAGGGGCAAAGCCAAACTTGGTAACAGACCCCACCTCTGAACACTCCGGGGGTCGCACGGCTGCTGATCTGGCATCCATGAACGGTTACGGAGGCTTAGCTGCATATCTTTCTGAAAAGTCCTTGGTAGCACAATTCGAGGACATGAGTTTAGCTGGAAATATCAGTGGTTCATTGCAAAGCACCGCAGCTGATCCAGCCAACCTGGAGAACCTAAGTGAGGACCAAGAGAATATAAAAGAAACTCTGGCAGCTTACCGGACGGCTGCTGATGCTGCGGCTCGTATTCAAGTTGCTTTCCGAGAACACTCTCTAAAGCAAAGGACCAAGCATGTGGAGATCTCCAATCCGGAGGAGGAGGCACGGAATATAGTTGCGGCCTTGAAAATTCAGCATGCTTTCCGTAACTATGAGACCCGAAAGAAAAAAGCAGCTGCTCGTATTCAGCATAGATTCCGAACTTGGAAGATACGTAAAGATTTCCTCAATATGCGGCGTCAAGTTATCAAAATTCAAGCACTGTTTCGAGGCTACAAAGCAAGGAGACAGTATAGTAAGATTGTATGGTCGGTTGGAGTTCTTGAGAAGGCTATATTGCGTTGGCGTTTAAAGAGAAAAGGCTTCCGGGGGCTCCAAGTTGAAGCAGTTGCAGAGGATAGGCAGGAAAGTGATGCCGAGGAGGAATTCTTCCAAGCGAGCCGGAAACAAGCCGAAGAGCGTATTGGCAGTTCTCTAGAACGCGTTCATGGCATGTTTTATTCAAAGAAAGCGCAAGAAGAATATCATAGAATGAAGCTGGCCCATAATGAAGCAAAACTGGAATTTGAAGAGCTTATGAATCCTGATACTGATATGGATGGTTGA | 2664 | 42.38 | MEEARSRWLRPNEIHAILCNYKHFSIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNTTFVRRCYWLLDKSLEHIVLVHYRETRELQGSPATPVNSSSTSASDPSPPWLLSEELDSGTDHAYHLGEKELLDPGDSITVQNHEKRLHEINTLDWDELLMNPTMLIEDQLFSNDQQNHNAINGSLTNVADNLLAEICPFDSPTEPIGINSSHLSESVYIPTMGDQVNSNAQTIEYTSTSQNIAYSSNILVNERLQGQDSFGQWITQIITDSPDSANDTGFGSSITTIQDTLLSASIDHHQPFVPEQIFTINEISPAWAFASEKTKILVTGFFHQEFLHLEKSKMLCICDGISIPAEMVQSGVYRLVVPSHSRGLVNLYMSIDGLKPISQVLNFEYCTPLLHDPIVSAEEKDKWNEFQVQMRLVYLLFSNSKTLDILSNKVSPNSLKDAKKFALKTSNISKSWTYFIKSIEENRTPFPPAKDGLFELILKNRLREWLLERVVEGSKKSSEFDGHGQGVIHLCAILGYTWAICLFAWSGLSLDFRDKHGWSALHWAAYYGREKMVGVLLSAGAKPNLVTDPTSEHSGGRTAADLASMNGYGGLAAYLSEKSLVAQFEDMSLAGNISGSLQSTAADPANLENLSEDQENIKETLAAYRTAADAAARIQVAFREHSLKQRTKHVEISNPEEEARNIVAALKIQHAFRNYETRKKKAAARIQHRFRTWKIRKDFLNMRRQVIKIQALFRGYKARRQYSKIVWSVGVLEKAILRWRLKRKGFRGLQVEAVAEDRQESDAEEEFFQASRKQAEERIGSSLERVHGMFYSKKAQEEYHRMKLAHNEAKLEFEELMNPDTDMDG | 887 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 4023379 | 4030294 | - | Conep14aG0074300.1 | Cone14ag0727 | 452576 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone14ag0727 | 887 | Gene3D | Immunoglobulins | 336 | 430 | IPR013783 | - | |
Cone14ag0727 | 887 | ProSiteProfiles | Ankyrin repeat profile. | 578 | 610 | IPR002110 | GO:0005515(InterPro) | |
Cone14ag0727 | 887 | SMART | ANK_2a | 578 | 607 | IPR002110 | GO:0005515(InterPro) | |
Cone14ag0727 | 887 | ProSiteProfiles | CG-1 DNA-binding domain profile. | 1 | 123 | IPR005559 | GO:0003677(InterPro) | |
Cone14ag0727 | 887 | Pfam | IQ calmodulin-binding motif | 766 | 784 | IPR000048 | GO:0005515(InterPro) | |
Cone14ag0727 | 887 | ProSiteProfiles | IQ motif profile. | 741 | 770 | - | - | |
Cone14ag0727 | 887 | Coils | Coil | 854 | 874 | - | - | |
Cone14ag0727 | 887 | Gene3D | - | 740 | 788 | - | - | |
Cone14ag0727 | 887 | Pfam | CG-1 domain | 3 | 116 | IPR005559 | GO:0003677(InterPro) | |
Cone14ag0727 | 887 | Gene3D | - | 504 | 641 | IPR036770 | - | |
Cone14ag0727 | 887 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 687 | 791 | IPR027417 | - | |
Cone14ag0727 | 887 | ProSiteProfiles | IQ motif profile. | 764 | 788 | - | - | |
Cone14ag0727 | 887 | MobiDBLite | consensus disorder prediction | 120 | 145 | - | - | |
Cone14ag0727 | 887 | SMART | iq_5 | 763 | 785 | IPR000048 | GO:0005515(InterPro) | |
Cone14ag0727 | 887 | SMART | iq_5 | 740 | 762 | IPR000048 | GO:0005515(InterPro) | |
Cone14ag0727 | 887 | ProSiteProfiles | Ankyrin repeat region circular profile. | 578 | 606 | - | - | |
Cone14ag0727 | 887 | SUPERFAMILY | Ankyrin repeat | 540 | 640 | IPR036770 | - | |
Cone14ag0727 | 887 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 2 | 872 | - | GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Cone14ag0727 | 887 | SMART | CG_1_2 | 1 | 118 | IPR005559 | GO:0003677(InterPro) | |
Cone14ag0727 | 887 | MobiDBLite | consensus disorder prediction | 122 | 140 | - | - | |
Cone14ag0727 | 887 | Pfam | Ankyrin repeats (3 copies) | 550 | 640 | IPR002110 | GO:0005515(InterPro) | |
Cone14ag0727 | 887 | Coils | Coil | 669 | 689 | - | - | |
Cone14ag0727 | 887 | ProSiteProfiles | IQ motif profile. | 689 | 718 | - | - | |
Cone14ag0727 | 887 | SUPERFAMILY | E set domains | 341 | 427 | IPR014756 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone14ag0727 | Cone-Chr14:4023379 | Cone8ag0227 | Cone-Chr8:1250902 | 6.45E-98 | dispersed | |
Cone14ag0727 | Cone-Chr14:4023379 | Cone15ag0616 | Cone-Chr15:3199290 | 4.03E-114 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44765 | PF01148 | CTP_transf_1 | 3.70E-65 | CL0234 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone14ag0727 | K21596 | - | mdm:103431936 | 1144.03 |