Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0727 ATGGAGGAAGCAAGATCGAGATGGCTCCGTCCAAATGAGATTCATGCAATTCTTTGTAATTACAAGCATTTCAGCATCCATGTTAAGCCAGTTAACTTGCCCAAAAGTGGAACCATTGTGTTATTTGATCGGAAGATGCTTAGAAACTTCAGGAAAGATGGTCATAACTGGAAGAAGAAAAAGGATGGGAAGACTGTTAAAGAAGCACATGAACACCTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGATAACACAACCTTCGTCCGGAGATGTTACTGGCTACTTGATAAGAGTCTAGAACACATAGTCCTGGTCCATTATCGTGAAACACGAGAGTTGCAAGGTTCTCCAGCCACACCCGTGAATTCTAGTTCTACTTCAGCCTCTGACCCATCTCCTCCCTGGCTTTTATCTGAAGAACTTGACTCTGGGACTGATCATGCTTATCATCTTGGCGAGAAAGAACTTCTAGATCCTGGTGATAGTATAACTGTCCAGAATCATGAAAAGAGGCTTCATGAGATTAACACACTTGATTGGGATGAGCTTCTTATGAACCCAACTATGCTTATAGAAGACCAACTTTTTAGCAATGATCAACAGAATCACAATGCGATAAATGGGTCCCTAACAAATGTTGCTGATAATTTACTGGCTGAAATTTGTCCATTTGATAGTCCAACTGAACCAATTGGAATCAATAGCAGTCATTTGTCAGAGAGTGTCTATATTCCAACAATGGGCGATCAAGTAAATTCAAATGCGCAGACAATAGAATACACTTCCACTTCCCAAAATATTGCCTATTCCTCAAACATTTTGGTTAATGAGAGATTGCAAGGTCAGGACAGTTTTGGACAGTGGATAACCCAGATTATCACTGATTCTCCCGATTCAGCAAATGATACTGGTTTTGGGTCCTCGATTACAACTATTCAGGACACACTTCTCTCTGCTTCAATAGATCATCACCAACCTTTTGTTCCAGAACAAATATTTACCATAAATGAAATTTCACCAGCATGGGCTTTTGCATCAGAGAAAACCAAGATTCTAGTCACTGGATTTTTTCATCAAGAGTTCCTTCACCTGGAAAAGTCAAAAATGTTGTGCATCTGTGATGGTATCTCAATTCCTGCAGAAATGGTTCAATCTGGAGTATATCGCTTAGTTGTGCCATCACATTCCCGAGGATTAGTAAATCTGTATATGAGTATAGACGGTCTTAAGCCCATCAGTCAAGTTCTGAATTTCGAGTATTGCACACCATTATTGCATGACCCAATAGTTTCTGCAGAAGAGAAGGACAAGTGGAACGAGTTCCAAGTTCAAATGCGGCTGGTCTATCTGCTCTTCTCGAATTCTAAGACCCTTGACATTCTATCTAATAAGGTATCACCAAATTCACTTAAGGATGCAAAGAAGTTCGCTCTCAAAACCTCAAACATTTCTAAAAGCTGGACTTATTTCATCAAGTCAATTGAAGAGAATAGAACTCCATTTCCTCCAGCAAAAGATGGTCTGTTTGAACTTATTTTGAAGAACAGACTGAGAGAATGGTTGCTGGAAAGAGTTGTCGAAGGCTCCAAGAAGAGCTCCGAATTTGATGGGCATGGTCAAGGAGTAATACATTTATGTGCTATTTTGGGATATACGTGGGCTATATGTTTGTTTGCTTGGTCCGGTCTATCCCTGGATTTTCGGGACAAGCATGGATGGTCAGCTCTTCACTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGGAGTTCTCTTATCTGCAGGGGCAAAGCCAAACTTGGTAACAGACCCCACCTCTGAACACTCCGGGGGTCGCACGGCTGCTGATCTGGCATCCATGAACGGTTACGGAGGCTTAGCTGCATATCTTTCTGAAAAGTCCTTGGTAGCACAATTCGAGGACATGAGTTTAGCTGGAAATATCAGTGGTTCATTGCAAAGCACCGCAGCTGATCCAGCCAACCTGGAGAACCTAAGTGAGGACCAAGAGAATATAAAAGAAACTCTGGCAGCTTACCGGACGGCTGCTGATGCTGCGGCTCGTATTCAAGTTGCTTTCCGAGAACACTCTCTAAAGCAAAGGACCAAGCATGTGGAGATCTCCAATCCGGAGGAGGAGGCACGGAATATAGTTGCGGCCTTGAAAATTCAGCATGCTTTCCGTAACTATGAGACCCGAAAGAAAAAAGCAGCTGCTCGTATTCAGCATAGATTCCGAACTTGGAAGATACGTAAAGATTTCCTCAATATGCGGCGTCAAGTTATCAAAATTCAAGCACTGTTTCGAGGCTACAAAGCAAGGAGACAGTATAGTAAGATTGTATGGTCGGTTGGAGTTCTTGAGAAGGCTATATTGCGTTGGCGTTTAAAGAGAAAAGGCTTCCGGGGGCTCCAAGTTGAAGCAGTTGCAGAGGATAGGCAGGAAAGTGATGCCGAGGAGGAATTCTTCCAAGCGAGCCGGAAACAAGCCGAAGAGCGTATTGGCAGTTCTCTAGAACGCGTTCATGGCATGTTTTATTCAAAGAAAGCGCAAGAAGAATATCATAGAATGAAGCTGGCCCATAATGAAGCAAAACTGGAATTTGAAGAGCTTATGAATCCTGATACTGATATGGATGGTTGA 2664 42.38 MEEARSRWLRPNEIHAILCNYKHFSIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNTTFVRRCYWLLDKSLEHIVLVHYRETRELQGSPATPVNSSSTSASDPSPPWLLSEELDSGTDHAYHLGEKELLDPGDSITVQNHEKRLHEINTLDWDELLMNPTMLIEDQLFSNDQQNHNAINGSLTNVADNLLAEICPFDSPTEPIGINSSHLSESVYIPTMGDQVNSNAQTIEYTSTSQNIAYSSNILVNERLQGQDSFGQWITQIITDSPDSANDTGFGSSITTIQDTLLSASIDHHQPFVPEQIFTINEISPAWAFASEKTKILVTGFFHQEFLHLEKSKMLCICDGISIPAEMVQSGVYRLVVPSHSRGLVNLYMSIDGLKPISQVLNFEYCTPLLHDPIVSAEEKDKWNEFQVQMRLVYLLFSNSKTLDILSNKVSPNSLKDAKKFALKTSNISKSWTYFIKSIEENRTPFPPAKDGLFELILKNRLREWLLERVVEGSKKSSEFDGHGQGVIHLCAILGYTWAICLFAWSGLSLDFRDKHGWSALHWAAYYGREKMVGVLLSAGAKPNLVTDPTSEHSGGRTAADLASMNGYGGLAAYLSEKSLVAQFEDMSLAGNISGSLQSTAADPANLENLSEDQENIKETLAAYRTAADAAARIQVAFREHSLKQRTKHVEISNPEEEARNIVAALKIQHAFRNYETRKKKAAARIQHRFRTWKIRKDFLNMRRQVIKIQALFRGYKARRQYSKIVWSVGVLEKAILRWRLKRKGFRGLQVEAVAEDRQESDAEEEFFQASRKQAEERIGSSLERVHGMFYSKKAQEEYHRMKLAHNEAKLEFEELMNPDTDMDG 887
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4023379 4030294 - Conep14aG0074300.1 Cone14ag0727 452576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0727 887 Gene3D Immunoglobulins 336 430 IPR013783 -
Cone14ag0727 887 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515(InterPro)
Cone14ag0727 887 SMART ANK_2a 578 607 IPR002110 GO:0005515(InterPro)
Cone14ag0727 887 ProSiteProfiles CG-1 DNA-binding domain profile. 1 123 IPR005559 GO:0003677(InterPro)
Cone14ag0727 887 Pfam IQ calmodulin-binding motif 766 784 IPR000048 GO:0005515(InterPro)
Cone14ag0727 887 ProSiteProfiles IQ motif profile. 741 770 - -
Cone14ag0727 887 Coils Coil 854 874 - -
Cone14ag0727 887 Gene3D - 740 788 - -
Cone14ag0727 887 Pfam CG-1 domain 3 116 IPR005559 GO:0003677(InterPro)
Cone14ag0727 887 Gene3D - 504 641 IPR036770 -
Cone14ag0727 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 687 791 IPR027417 -
Cone14ag0727 887 ProSiteProfiles IQ motif profile. 764 788 - -
Cone14ag0727 887 MobiDBLite consensus disorder prediction 120 145 - -
Cone14ag0727 887 SMART iq_5 763 785 IPR000048 GO:0005515(InterPro)
Cone14ag0727 887 SMART iq_5 740 762 IPR000048 GO:0005515(InterPro)
Cone14ag0727 887 ProSiteProfiles Ankyrin repeat region circular profile. 578 606 - -
Cone14ag0727 887 SUPERFAMILY Ankyrin repeat 540 640 IPR036770 -
Cone14ag0727 887 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 872 - GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER)
Cone14ag0727 887 SMART CG_1_2 1 118 IPR005559 GO:0003677(InterPro)
Cone14ag0727 887 MobiDBLite consensus disorder prediction 122 140 - -
Cone14ag0727 887 Pfam Ankyrin repeats (3 copies) 550 640 IPR002110 GO:0005515(InterPro)
Cone14ag0727 887 Coils Coil 669 689 - -
Cone14ag0727 887 ProSiteProfiles IQ motif profile. 689 718 - -
Cone14ag0727 887 SUPERFAMILY E set domains 341 427 IPR014756 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0727 Cone-Chr14:4023379 Cone8ag0227 Cone-Chr8:1250902 6.45E-98 dispersed
Cone14ag0727 Cone-Chr14:4023379 Cone15ag0616 Cone-Chr15:3199290 4.03E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44765 PF01148 CTP_transf_1 3.70E-65 CL0234 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0727 K21596 - mdm:103431936 1144.03