Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0733 ATGGAAGAAGGAACGAGTCTGTTGATGGAGTCATCAGAGAACGGCACAGATTTATCCCAAGATGACATAGGAACTATCGAGGAAACACCAGAAGACACCATTTTGACCCGTCAAACGTCCATAAACCTCATCCCATTCATAGGCCAGAGGTTCATCTCCCAAGAAGCCGCTTATGAGTTCTATTGCAGTTTCGCTAAGCAATTTGGGTTTTCTATTAGACGTCATAGAACTAGAGGAAAAGATGGGGTTGGTCGTGGAGTTACGAGAAGGGATTTCATTTGCCATAGAGGCGGGTATCCCCAGATGAAGCTTTCTGAAGATGGGAAAATGCAAAGGAACCGAAAATCATCAAGATGTGGTTGCCAAGCTTACTTGAGGATTGTTAGGAAGGCCGATTTTGATGTTCTCGAATGGAGAATCACGGGATTTAGCAATATTCATAACCATGAATTATTTAAATCTAATGAAGTAAATCATCTTTATCCAGCTAATTGTACCATTTCACCAGATGATAAGAGTCAGATCTGCATGTTTGCCAAGGCAGGTATGTCCGTTCGACAAATGATAAGATTGATGGAGCTAGAGAAAGGTCTCAAGCTTGGTTGTTTGCCATTTACAGAGATGGATGTGAGGAATTTGATACAGTCATTTAGAAATGTTGATAAGGATAATGATGCTATTGATCTTGTTTCTATGTGTAAGAAGATGAAAGATGGGAATCCGAATTTTAAGTATGAGTTTAAGATAGATGGGTACAATCGGCTAGAGTGTATTGCGTGGTCTTATGCTTCGTCTGTTCAGGCATATGAGGTGTTTGGGGATGCGGTTATTTTCGACACAACTCACCGGATTGAAGCTTATGATATGTTATTAGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGCTTCTTTAGCTGTGTCCTTTTACGGGATGACAATTTGCAGTCTTTCTCCTGGGCATTGAAGACATTTTTAAGCTTCATGAACGGCAAGGCTCCACAAACGATATCAACGGACCACAACATGTGGCTAAAAGAGGCTATTGCTATTGAAGTGCCTGAGACAAAACACGCCTTTTGCATATGGCACATCGTTTCAAAGTTCTCTGATTGGTTTTCTTTTCCGCTCGGATCCCGATATGATGACTGGAAAGCTGAGTTTAATCGGATTTACGATCTTGAATCAGTTGATGAGTTTGAAGAAGCGTGGAGGGATATGGTTGATACTTACCAACTCCATTCCAATAGGCATATTGTCAGCTTATATGCATTACGGACATTTTGGGCTTTAGCATTCTTGAGAAACTACTTCTTTGCTGAAATGATGAGCGCCTGCCAATCTGAGTCGATAAATTCTTTCATCCAACGGTTTTTAATGGCAGAATGTCAAATAGATTGTTTTGTCGGCCAATTGGCTGACATAGTTGATTTTAACGATCGAGTCGGATCAAAGCAAAAGATGCAAAGAAAACAACAAAAAATCTTCCTTAAAACGGGTTCCCCTATCGAATCCCATGCCGCTTCCATTCTCACTCCTTACGCCTTCAACAAACTCCAAGAAGAGCTCGCCCTGGCCCCACAGTACGCATCCCTTCTCATGGACGAAAGTTGTTTCCAAGTCCGACATCATACTCAGATGGATGGTGGGTTCCGTGTGATCTGGGTCCCTTGCCATGAGCGCATAAGTTGTAGTTGCCGTCTATTCGAGTTTTCACGCATACTTTGTAGACATGTCCTTCGTGTCTTGTCTACTAATAACTGCTTTAACATCCCGGACCCGTACTTACCTTCTCGTTGGCGTAACAACACCTGTTCTTCCTCACCATCTTCCTCGAGACCTTTTCCAAATTCTAATCCAAGAGGAGGGCATTCCGAAAAGATTCATTTACTTAGGTCAATGGTCAATGCCCTTGTAACTGAATCAGTTGAAACGGAGGAACGACTTGATGTTGCATGTGAGCAAATTTCAATGGCATTGTCCCGTCTTAAGGATCTTCCTCGAGCCTATAATAACAAAAATTGTTCTTTGGATTTGTTGATGTTACCGGATGTGGAAGATGATGATAGTAATGTTGTTCATCTTGGGGTTGGAAGTCAAAACGAGTCTATGGTTACTTTAGGGAAGCTTAAGGAGAGAAGAATGAGAGATGGAGTTGATACTATTAGTCGAAAACGGAAGAGTTATTCAGGGTCTTATTGTGGGGGCCCATTTGGACATGATGGGTCGGATTGTCCGATAATGGATAGTGGTGATAATTTGGGTGGGGATGGTCTTGGGTACTTGTAG 2292 42.02 MEEGTSLLMESSENGTDLSQDDIGTIEETPEDTILTRQTSINLIPFIGQRFISQEAAYEFYCSFAKQFGFSIRRHRTRGKDGVGRGVTRRDFICHRGGYPQMKLSEDGKMQRNRKSSRCGCQAYLRIVRKADFDVLEWRITGFSNIHNHELFKSNEVNHLYPANCTISPDDKSQICMFAKAGMSVRQMIRLMELEKGLKLGCLPFTEMDVRNLIQSFRNVDKDNDAIDLVSMCKKMKDGNPNFKYEFKIDGYNRLECIAWSYASSVQAYEVFGDAVIFDTTHRIEAYDMLLGIWLGVDNHGMTCFFSCVLLRDDNLQSFSWALKTFLSFMNGKAPQTISTDHNMWLKEAIAIEVPETKHAFCIWHIVSKFSDWFSFPLGSRYDDWKAEFNRIYDLESVDEFEEAWRDMVDTYQLHSNRHIVSLYALRTFWALAFLRNYFFAEMMSACQSESINSFIQRFLMAECQIDCFVGQLADIVDFNDRVGSKQKMQRKQQKIFLKTGSPIESHAASILTPYAFNKLQEELALAPQYASLLMDESCFQVRHHTQMDGGFRVIWVPCHERISCSCRLFEFSRILCRHVLRVLSTNNCFNIPDPYLPSRWRNNTCSSSPSSSRPFPNSNPRGGHSEKIHLLRSMVNALVTESVETEERLDVACEQISMALSRLKDLPRAYNNKNCSLDLLMLPDVEDDDSNVVHLGVGSQNESMVTLGKLKERRMRDGVDTISRKRKSYSGSYCGGPFGHDGSDCPIMDSGDNLGGDGLGYL 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4077055 4081383 + Conep14aG0074900.1 Cone14ag0733 452582

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0733 763 MobiDBLite consensus disorder prediction 7 23 - -
Cone14ag0733 763 Pfam MULE transposase domain 276 368 IPR018289 -
Cone14ag0733 763 SMART 26again6 563 590 IPR006564 GO:0008270(InterPro)
Cone14ag0733 763 Pfam SWIM zinc finger 562 586 IPR007527 GO:0008270(InterPro)
Cone14ag0733 763 ProSiteProfiles Zinc finger SWIM-type profile. 552 588 IPR007527 GO:0008270(InterPro)
Cone14ag0733 763 MobiDBLite consensus disorder prediction 1 29 - -
Cone14ag0733 763 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Cone14ag0733 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 45 665 IPR031052 GO:0006355(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0733 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0733 Cone-Chr14:4077055 Cone7ag0771 Cone-Chr7:4810430 5.99E-274 dispersed
Cone14ag0733 Cone-Chr14:4077055 Cone5ag1813 Cone-Chr5:12817203 3.35E-161 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g107 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag0733 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009366 0 2 0 0 0 1 2 1 1 1 1 1 2 2 1 2 1 2 2 1 1 1 1 0 1 1 0 1 1 3 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44766 PF02991 Atg8 7.10E-50 CL0072 Cone TF