Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0747 ATGGCGTCGGATCAGTTGATGAGCAGGATTGGGGCTCGCTACGTGAAAATGCAACCGGAGGCTACGTCGTCGGCGGCGATGTCCTCGTTTCTCACTCCTCGTCAAGGAGCTAACGAGTTCGGTCGGATTTTCGACGACTTGCCTAGCGCCTCCATCGTCTCCGTTTCTCGACCGGACGTGGCCGATTTTAGCCCCATGCTTCTTTCTTACGTTATCGAGTTCCACTACAAGCAGTTTAAATGGCGCTTGTTGAAGAAAGCTCCTCAAGTCTTCTATTTACACTTTGCACTAAAGAAACGAGCCTTTTTTGAGGAAATTCAAGAGAAACAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGATCACACAGCAGTGGCGCCAGATGAAGATGAACCAGATGATGATGTTATTGCCATGCACCCTGAGGAAAGTGCTAAAAATAGAGATGTTCCATCTAGTGCTGCCCTTCCAATCATTCGTCCTGCTCTGGGAAGGCAGGAGTCAGTGTCAGATAGAGCCAAGGTTGCAATGCAAGGGTATCTGAACCACTTCTTAGGAAACATGGATATTGTTAACTCTCAAGAGGTTTGCAGGTTCTTAGAGGTCTCTAAGTTATCATTTTTACCAGAATATGGCCCCAAGCTAAAAGAAGATTACGTTATGGTGAAGCATCTACCTAAAATTCCAAAGGAAGATGACTCTAGGAATTGCTGCGGATGCCCTTGGCTCTACTGTTGCAATGACAATTGGCAAAAGGTTTGGGCCGTACTGAAACCAGGATTTTTGGCCTTGCTGGAAGACCCTTTTTCTCTTCAACTGTTAGATATAATAGTATTCGATATGCTACCAGCTTCAGACGGCAATGGAGAAGGACAGATTTCACTAGCAAAAGAAATAAAGGAACGGAATCCTTTGCGCCATACATTCAGGGTGACGTGTGGAAACCGAAGCCTTAGATTAAGAGTAAAGAATGGTTCTAAGGTTAAAGACTGGGTTGCTGCAATTAATGATGCTGGACTGAGACCACCTGAGGGCTGGTGTCACCCACATCGATTTGGTTCTTTTGCACCACCAAGGGGATTGGCTGAAGATGGTAGTCAGGCTCAGTGGTTTGTAGATGGTCGAGCAGCATTTGAAGCTATTGCTTCCTCAATTGAAGGTGCAAAATCGGAGATTTTCATTTGTGGCTGGTGGCTCTGCCCAGAACTTTATCTCCGGCGTCCTTTTCATGCTCATGCTTCATCAAGGCTTGATGCTTTACTTGAAGACAAAGCTAAGCAGGGTATTCAGATATATATTCTTCTTTATAAAGAGCTTGCTCTTGCCTTAAAGATCAACAGCGTATATAGCAAGAGGAAACTTCTTAGCATCCATGAGAATGTGAGGGTCCTACGTTATCCTGACCACTTCTCTTGTGGTGTTTATCTATGGTCCCACCATGAAAAACTTGTCATTGTTGATCACCAAATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGACACACCTGACCACAAGGTGGGTGATTTTCCCGCTTCGGTGTGGCCTGGAAAGGACTATTATAACCCACGGGAATCTGAACCAAATTCATGGGAAGACACAATGACAGATGAGTTGGACCGTACAAAATATCCTCGTATGCCTTGGCATGACGTTCACTGTGCCCTTTGGGGACCACCGTGTCGGGACATGGCTAGGCATTTTGTCCAGCGCTGGAACTACGCAAAGAGAAATAAAGCTCCATATGAGCAAGCTATACCACTACTTATGCCTCAGCACCACATGGTTGTTCCTCACTACTTGGGGAGGAGCCGAGAGTTGGAGATTAAATGTAACAATTTTGAAAGTTTTGACAAGATTAAGACACAGGATCCATTTTCTGCAAGGTCATCTTGTCAAGATATCCCACTGCTTTTGCCTCAAGAAGTAGATGGAGTTGGTTCTGAAACTGAAGATCAAAAGTTAGCTGAATTGGACTCCCCTGATAGTCTCCTTGATCAACCAACCATCATTAACAGTGGTCTTTCTTTCTCCTTCCAGAGGTCGAAACTTGAACCGCCACCAGATATGCCAATGAAAACTTTTGTAGATGACCTTGACATTTTGGGTAGTCATGGTGAAGCATCTGGTGATGGGGTTACACACCAAAGCATGCGAAGTTCAGATCCGGAGTGGTGGGAAACACAAGAGAGGGGAGGTCAAGGGGGTTTGACAGATGAATCTGGACAAGTTGGTCCCCGTGCTTCATGCCGGTGTCAGGTTATTAGAAGTGTCAGCCAATGGTCTGCTGGAACAAGCTTGACTGAACAGAGCATTCACAATGCTTATTGCTCCCTTATTGAGAATGCTGAACATTTTGTCTATATTGAGAATCAATTTTTCATATCAGGTCTTTCAGGAGATGAGATAATACAAAATAGAGTATTAGAAGCAGTATACCGTCGAATTATGAGAGCCTACAATGAGAAGAAGATTTTTAGGGTTATTATTGTCATACCACTCTTACCTGGTTTCCAGGGAGGTCTTGATGACAGTGGTGCAGCATCCGTAAGAGCCATAATGCACTGGCAGTATCGCACTATCCGTAGAGGACCATATTCGATATTGCACAATCTTTATGATAGTCTTGGTCCTAAAGCACATGATTACATCTCTTTCTATGGCCTCAGATCTTATGGTAACCTTTTTGATGGTGGTCCTGTGGCTTCTAGTCAGGTGTATGTGCACAGTAAAGTCCTGATTGTTGATGATTGTACTGCTTTGATTGGATCAGCTAACATCAATGATAGGAGTTTACTTGGCTCAAGAGATTCTGAGATTGCGATAGTTATTGAAGACAAAGAGCTTGTTAACTCATATATGGGAGGGAAATTGTGGCAAGCTGGAAAGTTTTGTTTAAGTCTCCGCCTCTCTCTTTGGTCTGAACACCTTGGTCTTCGTCCCAGTCAGATTAATCAAATCATTGATCCAGTTGTTGATTCAACTTACAAGAATATATGGATGGCTACTGCTAAGACAAACACAGCAATCTACCAAGATGTTTTCTCCTGCATGCCTAATGACCTCGTACATTCCAGAGTAGCACTCAGACAAAGCATGGCGCTATGGAAAGAGAAACTCGGGCACACTACAATCGATTTAGGGATTGCACCCGAAAAGCTCGAATCCTATCAGAATGGAGAAATAAAAAAGATGGACCCCATGGAGAGACTAGAGTCGGTGAAGGGTCATCTCGTTTCATTTCCTTTGGATTTCATGTGCAAGGAAGACTTGCGCCCTGTATTTAATGAAAGTGAGTACTATGCATCTCAAGTTTTTCATTGA 3342 43.81 MASDQLMSRIGARYVKMQPEATSSAAMSSFLTPRQGANEFGRIFDDLPSASIVSVSRPDVADFSPMLLSYVIEFHYKQFKWRLLKKAPQVFYLHFALKKRAFFEEIQEKQEQVKEWLQNLGIGDHTAVAPDEDEPDDDVIAMHPEESAKNRDVPSSAALPIIRPALGRQESVSDRAKVAMQGYLNHFLGNMDIVNSQEVCRFLEVSKLSFLPEYGPKLKEDYVMVKHLPKIPKEDDSRNCCGCPWLYCCNDNWQKVWAVLKPGFLALLEDPFSLQLLDIIVFDMLPASDGNGEGQISLAKEIKERNPLRHTFRVTCGNRSLRLRVKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLAEDGSQAQWFVDGRAAFEAIASSIEGAKSEIFICGWWLCPELYLRRPFHAHASSRLDALLEDKAKQGIQIYILLYKELALALKINSVYSKRKLLSIHENVRVLRYPDHFSCGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPDHKVGDFPASVWPGKDYYNPRESEPNSWEDTMTDELDRTKYPRMPWHDVHCALWGPPCRDMARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVVPHYLGRSRELEIKCNNFESFDKIKTQDPFSARSSCQDIPLLLPQEVDGVGSETEDQKLAELDSPDSLLDQPTIINSGLSFSFQRSKLEPPPDMPMKTFVDDLDILGSHGEASGDGVTHQSMRSSDPEWWETQERGGQGGLTDESGQVGPRASCRCQVIRSVSQWSAGTSLTEQSIHNAYCSLIENAEHFVYIENQFFISGLSGDEIIQNRVLEAVYRRIMRAYNEKKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTIRRGPYSILHNLYDSLGPKAHDYISFYGLRSYGNLFDGGPVASSQVYVHSKVLIVDDCTALIGSANINDRSLLGSRDSEIAIVIEDKELVNSYMGGKLWQAGKFCLSLRLSLWSEHLGLRPSQINQIIDPVVDSTYKNIWMATAKTNTAIYQDVFSCMPNDLVHSRVALRQSMALWKEKLGHTTIDLGIAPEKLESYQNGEIKKMDPMERLESVKGHLVSFPLDFMCKEDLRPVFNESEYYASQVFH 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4169913 4179716 - Conep14aG0076400.1 Cone14ag0747 452596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0747 1113 CDD PLDc_vPLD1_2_yPLD_like_2 770 954 - -
Cone14ag0747 1113 SUPERFAMILY PH domain-like 245 341 - -
Cone14ag0747 1113 Pfam Phospholipase D Active site motif 478 505 IPR001736 GO:0003824(InterPro)
Cone14ag0747 1113 Gene3D Endonuclease Chain A 737 970 - -
Cone14ag0747 1113 SMART pld_4 478 505 IPR001736 GO:0003824(InterPro)
Cone14ag0747 1113 SMART pld_4 910 937 IPR001736 GO:0003824(InterPro)
Cone14ag0747 1113 MobiDBLite consensus disorder prediction 651 673 - -
Cone14ag0747 1113 Coils Coil 99 119 - -
Cone14ag0747 1113 SMART PH_update 217 345 IPR001849 -
Cone14ag0747 1113 ProSiteProfiles PH domain profile. 252 343 IPR001849 -
Cone14ag0747 1113 CDD PH_PLD 194 341 - -
Cone14ag0747 1113 Gene3D - 245 343 IPR011993 -
Cone14ag0747 1113 SUPERFAMILY Phospholipase D/nuclease 323 598 - -
Cone14ag0747 1113 Gene3D Endonuclease Chain A 364 600 - -
Cone14ag0747 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 910 937 IPR001736 GO:0003824(InterPro)
Cone14ag0747 1113 FunFam Phospholipase 744 964 - -
Cone14ag0747 1113 CDD PLDc_vPLD1_2_yPLD_like_1 371 515 - -
Cone14ag0747 1113 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 478 505 IPR001736 GO:0003824(InterPro)
Cone14ag0747 1113 Pfam PLD-like domain 912 959 IPR025202 -
Cone14ag0747 1113 SUPERFAMILY Phospholipase D/nuclease 751 960 - -
Cone14ag0747 1113 PIRSF PLD_euk 49 639 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cone14ag0747 1113 PIRSF PLD_euk 691 1113 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cone14ag0747 1113 PANTHER PHOSPHOLIPASE D 195 1094 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0747 Cone-Chr14:4169913 Cone9ag1632 Cone-Chr9:11614724 3.88E-33 dispersed
Cone10ag0798 Cone-Chr10:4048817 Cone14ag0747 Cone-Chr14:4169913 0 wgd
Cone14ag0747 Cone-Chr14:4169913 Cone3ag0820 Cone-Chr3:4208748 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0747 K01115 - csv:101211856 1824.29