Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0756 ATGTGCTACAAGGCTTATGGAAGTGGGAAGGAAGACACTCCCTTATGTGATGTGCCAGGGTTTGAAAATTGCAGAATGAAACTGCTAAGACACGTGTCTTTTGTAGATTGTCCTGGTCATGATATTCTCATGGCTACTATGCTTAATGGAGCTGCTATTATGGATGGGGCATTACTTCTGATTGCAGCTAATGAGAGCTGCCCCCAACCTCAAACTTCTGAGCATCTGGCTGCTGTTGAAATTATGCGCCTTCAACATATTATAATTCTTCAAAATAAAGTTGATCTTATTCAAGAAAATGTAGCCATCAATCAGCATGAATCAATTGAGAAATTTATTCAAGGAACTGTAGCTGATGGCGCACCTGTTGTGCCAATTTCTGCTCAACTGAAGTATAATATAGATGTCGTGTGTGAATATATCGTGAAAAAAATTCCCATCCCAGAGCGGAACTTTGTCTCACCTCCAGAAATGATTGTTATCCGGTCTTTTGATGTCAATAAGCCTGGATTTGAGGTTGATGAAATAAAAGGTGGTGTGGCTGGTGGAAGTATCCTAAGGGGTGTCTTGAGGGTGAATCAATTTATTGAAGTTCGTCCAGGGATTGTAGTTAAAGATGAAAGTGGGAATATCAAGTGCACCCCAATATATTCAAGGATCGTTTCTTTGTATGCTGAGCAAAACGAGCTGCAATTTGCAGTACCTGGAGGTCTCATTGGTGTAGGCACAACCATGGATCCGACTTTGACCCGTGCAGATAGATTGGTTGGTCAGGTTCTCGGTGAAGTTGGCTCACTCCCTGAAGTTTTTGTTGAGCTCGAGGTTAACTTCTTCCTTCTGAGACGGCTTCTAGGTGTTAGGACAAAGGGCACGGAGAGAGGGGGAAGGGTCTCAAAGCTGGCCAAAGCCGAGATTCTAATGTTGAACATTGGATCAATGTCTACAGGGGCTAGAGTACTTGCCGTAAAAAATGATCTCGCAAAATTGCAACTAACTTCTCCAGTTTGCACTAGCAAAGGGGAAAAGATTGCTCTGAGCCGGCGAGTCGAGAAGCATTGGCGGCTTATTGGGTGGGGCCAGATTCAGGCCGGAACCACTCTTGATGTCCCACCCTGCCCTATTTGA 1125 44.09 MCYKAYGSGKEDTPLCDVPGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHESIEKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPEMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLRVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGTERGGRVSKLAKAEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPPCPI 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4252020 4254813 + Conep14aG0077300.1 Cone14ag0756 452605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0756 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 148 IPR027417 -
Cone14ag0756 374 CDD eIF2_gamma_III 267 361 IPR015256 -
Cone14ag0756 374 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 149 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0756 374 Gene3D - 1 150 IPR027417 -
Cone14ag0756 374 Pfam Elongation factor Tu GTP binding domain 30 146 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cone14ag0756 374 Gene3D Translation factors 152 266 - -
Cone14ag0756 374 FunFam Eukaryotic translation initiation factor 2 subunit gamma 1 150 - -
Cone14ag0756 374 FunFam Eukaryotic translation initiation factor 2 subunit gamma 151 266 - -
Cone14ag0756 374 SUPERFAMILY Translation proteins 150 264 IPR009000 -
Cone14ag0756 374 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 369 IPR050543 GO:0000049(PANTHER)|GO:0001731(PANTHER)|GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005850(PANTHER)
Cone14ag0756 374 CDD eIF2_gamma_II 151 264 IPR044127 GO:0000049(InterPro)
Cone14ag0756 374 Gene3D Translation factors 267 366 - -
Cone14ag0756 374 Pfam Initiation factor eIF2 gamma, C terminal 272 361 IPR015256 -
Cone14ag0756 374 Pfam Elongation factor Tu domain 2 178 260 IPR004161 GO:0005525(InterPro)
Cone14ag0756 374 FunFam Eukaryotic translation initiation factor 2 subunit gamma 267 366 - -
Cone14ag0756 374 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 265 362 IPR009001 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0756 Cone-Chr14:4252020 Cone15ag0766 Cone-Chr15:4567827 2.15E-269 wgd
Cone14ag0756 Cone-Chr14:4252020 Cone4ag0144 Cone-Chr4:664480 3.60E-261 wgd
Cone14ag0756 Cone-Chr14:4252020 Cone7ag0140 Cone-Chr7:585994 4.40E-262 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0756 K03242 - csv:116403970 716.842