Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0778 ATGGGTGGTTGCTTTCCTTGTTTCGAATCATCCGATAAGGAAGGAGGAGGAGTGGGAGGTGTGAAGGAAGTGATCAAGAAGGATTCAGTTAAGGAGGGCTCTGTTCTTCAGTCTCAACATGATAGCAGAGCTAGCTCTGATAAATCGAAAACAAAGAGTGGTACAGATTCAAAGAAGGAATCTTCAGTCCCGAAAGATGGACACGCAACACATATTGCAGCTCAAACTTTTACATTTCGAGAGCTTGCTGCTGCCACCAAAAATTTCAGGCCAGAATGTTTATTGGGTGAAGGAGGATTTGGACGTGTTTATAAAGGTCGGCTTGAGAGCACAGGGCAGGTAGTGGCTGTTAAACAGCTAGATCGAAATGGCCTTCAGGGAAACAGGGAATTTTTGGTTGAGGTTCTAATGCTAAGCCTTTTACACCATCAAAATCTCGTTAATTTAATTGGTTATTGTGCCGATGGAGACCAACGCCTTCTCGTTTATGAATTCATGCCATTGGGATCCTTAGAGGATCATTTACATGATCTTTCACCCGGTAAGGAACCTTTGGATTGGAATACGAGAATGAAAATTGCAGCCGGAGCAGCTAAGGGGTTGGAATATTTGCATGATAAAGCCAACCCTCCTGTTATATACAGAGACTTAAAATCATCCAACATTCTTCTGGATGAAGGGTATCATCCTAAGTTGTCCGATTTCGGTCTTGCCAAACTCGGCCCTGTTGGTGACAAGACTCATGTCTCTACACGGGTCATGGGAACATACGGTTATTGTGCTCCAGAGTATGCTATGACCGGTCAACTCACTTTGAAATCCGACGTCTATAGCTTTGGAGTCGTCTTTCTAGAAATAATTACAGGGCGGAAGGCTATTGATAGCACACGATGTCCTGGAGAGCACAATCTTGTTGCATGGGCCCGGCCACTATTCAAGGACCGTCGGAAATTTCCGAAAATGGCAGACCCATTGCTTCAGGGACGTTACCCGATGAGAGGACTTTACCAAGCTCTTGCCGTGGCAGCAATGTGTTTGCAAGAGCAAGCTGCTACCCGGCCTTTAATTGGTGATGTTGTTACGGCTCTTACATATCTAGCCTCCCAATCTTATGACCCAAATTCCACTTCCTCTCTTAGTAACAGAGTGGGCCCGTCAACTCCTAGGAGCAGCAGAGGAGACGAACGGAGAGGATCGGCTGATGGGCTAGATAGTCCTGTGGATCAAGGACGTGGTGGTGGGCGGCATGGGTCTTCTCCTTCAACCCATAGAAATTCACCCGATTTCCGGAAGCGGGATCCGGTTAGGGAGTTAAGTGGCAGTGCTGGTTCAGAGTTGAGCAGGATAGAGACGGGTGGTGGTGGGTCTGGGAGAAAATGGGGGTTAGATGAGTCGGACCGGGATAGTCCCGTGAGCGTTGGGAGAGCAGGTGAGACACCAAGGAGTAATCGGGATCTGGATAGAGAACGAGCCGTGGCTGAGGCTAAAGTGTGGGGTGAAAATTGGAGAGAGAAGAAAAGAGCAAGTGCAATGGGTGGTAGCTTTGATGGTACCCCATGA 1560 47.63 MGGCFPCFESSDKEGGGVGGVKEVIKKDSVKEGSVLQSQHDSRASSDKSKTKSGTDSKKESSVPKDGHATHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLSPGKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLEIITGRKAIDSTRCPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQSYDPNSTSSLSNRVGPSTPRSSRGDERRGSADGLDSPVDQGRGGGRHGSSPSTHRNSPDFRKRDPVRELSGSAGSELSRIETGGGGSGRKWGLDESDRDSPVSVGRAGETPRSNRDLDRERAVAEAKVWGENWREKKRASAMGGSFDGTP 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4523716 4531051 + Conep14aG0079500.1 Cone14ag0778 452627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0778 519 FunFam Serine/threonine-protein kinase PBS1 166 381 - -
Cone14ag0778 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0778 519 MobiDBLite consensus disorder prediction 371 388 - -
Cone14ag0778 519 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524(InterPro)
Cone14ag0778 519 FunFam Serine/threonine-protein kinase PBS1 62 165 - -
Cone14ag0778 519 Gene3D Transferase(Phosphotransferase) domain 1 166 382 - -
Cone14ag0778 519 SMART serkin_6 89 366 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0778 519 PANTHER OS07G0668900 PROTEIN 46 381 - -
Cone14ag0778 519 MobiDBLite consensus disorder prediction 371 489 - -
Cone14ag0778 519 SUPERFAMILY Protein kinase-like (PK-like) 75 382 IPR011009 -
Cone14ag0778 519 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0778 519 Gene3D Phosphorylase Kinase; domain 1 59 165 - -
Cone14ag0778 519 MobiDBLite consensus disorder prediction 19 34 - -
Cone14ag0778 519 Pfam Protein tyrosine and serine/threonine kinase 94 292 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0778 519 CDD STKc_IRAK 95 364 - -
Cone14ag0778 519 MobiDBLite consensus disorder prediction 43 66 - -
Cone14ag0778 519 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0271 Cone-Chr10:1290438 Cone14ag0778 Cone-Chr14:4523716 5.49E-192 dispersed
Cone11ag0794 Cone-Chr11:6350743 Cone14ag0778 Cone-Chr14:4523716 1.10E-216 dispersed
Cone11ag0812 Cone-Chr11:6623544 Cone14ag0778 Cone-Chr14:4523716 6.19E-168 dispersed
Cone11ag1273 Cone-Chr11:9465606 Cone14ag0778 Cone-Chr14:4523716 3.29E-169 dispersed
Cone14ag0778 Cone-Chr14:4523716 Cone1ag1332 Cone-Chr1:56450553 1.08E-191 dispersed
Cone9ag0499 Cone-Chr9:2387964 Cone14ag0778 Cone-Chr14:4523716 9.33E-91 dispersed
Cone14ag0778 Cone-Chr14:4523716 Cone4ag0167 Cone-Chr4:783755 6.47E-204 wgd
Cone14ag0778 Cone-Chr14:4523716 Cone5ag0023 Cone-Chr5:152332 3.19E-85 wgd
Cone14ag0778 Cone-Chr14:4523716 Cone7ag0170 Cone-Chr7:711534 2.79E-282 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82093 PF10345 Cohesin_load 6.90E-15 CL0020 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0778 - - - 0.0