Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0804 ATGGGCTGTGTCCATGGAAGGTGTTGCAGCCAATACCCACCCTCGTCGGACGGAGACTCACCGGCCGGAGGTCCATGCAACCCACGGGCTAGAACCGTTCTCTCAGAGAGATCCTTAGAGGTAGTTCCTGTTCCTTCCCACAATTACAGTTTAGAATACTCTGTTTTCACTCAACGTGGTTACTACCCTGAATCGCCGGAAAAAGAAAACCAGGACAGTTTCTGCATCAAAGCACAAATCCAAGGTAACCCTAATATCCATTTATTCGGCGTATTTGATGGGCACGGTCAATTTGGGATGGAATGTTCGAATTTCGTTAAAGATAGGCTAGTAGAAATACTTTCCAATGACCCCACATTGTTACACGATCCTGTACAAGCTTATACCTCAGCATTTCTAGCTACAAATCAGGAACTACATAACAGTGAGATAGATGATTCTATGAGTGGCACAACTGCAATTACGGTCCTAGTTATAGGGGACACTCTCTATGTAGCAAATGTGGGTGATTCTCGGGCGGTTATTTCGGTTAAAGAAGAAGGGGGTCGGAATGTGGCTGAGGATTTGTCCAAGGATCAGACCCCGTTTAGGAAAGATGAGTATGAGAGGGTGAAGCAATGTGGGGCCCGAGTTCTGAGTGTTGATCAAGTGGAAGGGCTTAAGGATCCAGAGATTCAGAACTGGGGTAATGAAGAGAGCCAGGGTGGGGACCCACCTCGGCTGTGGGTCCCACATGGGATGTATCCCGGGACCGCATTCACGAGGAGCGTGGGGGATGATACAGCAGAGAAGATCGGTGTGGTTGCTTTGCCAGAGGTTACGGTGGTCCGACTCACACCGAATCATCTCTTCTTTGTTGTCGCAAGCGATGGAATTTTCGAGTTTCTCCCGAGTCAAACTGTTGTCAATATGGCAGCAAGATGTCCAGATCCTCGGGATGCATGCTCTGCTATTGCAGGAGAGTCGTACAAACAGTGGTTGGAACACGAAAACCGGACAGATGATATAACAATCATCCTTGTACATATCAGGGGCTTGTCTAATGTGCAATTGCTGATACTGGACAAACAGGGAATACTAATAATAATACTATTAGGCCAAGCAGGACTGGGAAAGCAACCTCTGAGGTAA 1131 47.48 MGCVHGRCCSQYPPSSDGDSPAGGPCNPRARTVLSERSLEVVPVPSHNYSLEYSVFTQRGYYPESPEKENQDSFCIKAQIQGNPNIHLFGVFDGHGQFGMECSNFVKDRLVEILSNDPTLLHDPVQAYTSAFLATNQELHNSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVISVKEEGGRNVAEDLSKDQTPFRKDEYERVKQCGARVLSVDQVEGLKDPEIQNWGNEESQGGDPPRLWVPHGMYPGTAFTRSVGDDTAEKIGVVALPEVTVVRLTPNHLFFVVASDGIFEFLPSQTVVNMAARCPDPRDACSAIAGESYKQWLEHENRTDDITIILVHIRGLSNVQLLILDKQGILIIILLGQAGLGKQPLR 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4760126 4763492 - Conep14aG0082100.1 Cone14ag0804 452653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0804 376 CDD PP2Cc 68 343 IPR001932 -
Cone14ag0804 376 ProSiteProfiles PPM-type phosphatase domain profile. 52 343 IPR001932 -
Cone14ag0804 376 SMART PP2C_4 44 341 IPR001932 -
Cone14ag0804 376 SUPERFAMILY PP2C-like 36 345 IPR036457 -
Cone14ag0804 376 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169(InterPro)
Cone14ag0804 376 Pfam Protein phosphatase 2C 69 321 IPR001932 -
Cone14ag0804 376 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 47 345 - -
Cone14ag0804 376 PANTHER PROTEIN PHOSPHATASE 53 342 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone14ag0804 376 Gene3D - 38 344 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0804 Cone-Chr14:4760126 Cone4ag0752 Cone-Chr4:4192648 3.07E-131 dispersed
Cone14ag0804 Cone-Chr14:4760126 Cone15ag0805 Cone-Chr15:4938604 1.47E-240 wgd
Cone14ag0804 Cone-Chr14:4760126 Cone4ag0190 Cone-Chr4:891397 9.42E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0804 - - - 0.0