Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0809 ATGAGTTCTGAAATTCCCAAATCCATTGTTTCCACCCTTTTATTACTCAATCTCCTCCTCTATTTCATTGCCCTTGTAATCGCTTCTTTGGCCATAAATCATGGGATTGACAAATCTAGAGAAACAGCACGTATATTTCCGATCTACTTTCCAATGGGAAATGTGGCGACAGGTTTTTTCGTAATTTATTCATTGTTAATGGGCGTAATGGGTGTGACCACATCAATCACTGGTCTCACCAATGTATCCAATTGGGATGCACCCAATTCCCTCACAGCTGCTGCCTCTTCTATGGCTACTTGGTCCATCACACTACTCGCAATGGGATTGGCATGTCGAGGGATTCAACACGACTGGACTGATTCAAACTTGGTATGCATTTCATGTAATCAATAA 396 41.67 MSSEIPKSIVSTLLLLNLLLYFIALVIASLAINHGIDKSRETARIFPIYFPMGNVATGFFVIYSLLMGVMGVTTSITGLTNVSNWDAPNSLTAAASSMATWSITLLAMGLACRGIQHDWTDSNLVCISCNQ 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4814471 4816181 + Conep14aG0082600.1 Cone14ag0809 452658

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0809 131 PANTHER AWPM-19-LIKE FAMILY PROTEIN 1 126 IPR008390 -
Cone14ag0809 131 Pfam AWPM-19-like family 15 125 IPR008390 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0809 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0809 Cone-Chr14:4814471 Cone9ag0927 Cone-Chr9:4547172 7.47E-23 dispersed
Cone14ag0809 Cone-Chr14:4814471 Cone7ag0204 Cone-Chr7:863223 7.86E-46 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g411 Blo01g00144 . . . . . . . . . Cma06g01443 . Car06g01246 . Sed02g1282 Cpe08g00231 . Bhi01g00874 Tan10g0908 Cmetu06g1351 . . . Lcy11g1485 . . . . . . . Cone14ag0809 . Cone7ag0204 . Lsi05g01469 . . Cme06g00660 . Blo07g00201 Bda11g00554 . . Bpe13g00629 . Bma06g01533 . Cmo06g01446 . . . . . . . . . . . . . . Cla05g00589 Cam05g0648 Cec05g0656 Cco05g0652 Clacu05g0641 Cmu05g0610 Cre05g0678 . Csa03g01385 Chy06g00628 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014108 1 1 1 1 1 0 1 0 0 1 0 0 0 1 1 1 0 2 1 0 1 1 1 0 1 1 1 2 1 1 23