Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0847 ATGAGGAATAATATTGATAGTACAAAAGATGGGGACAATGATCAAGCGGACAGTGTAGATCTACCTTTTGTCATCACTCTTCTAAGCTATCATATGAACAATTTCTTTTACCATGAAATTGACAATTCGAAAGTATGTATCATTCTTGTGTACGTGGATCAGATTGGATCAAGAGGCAAGACAGCTATTGTCAAGAAAGATACCAATTCGATCAAGCCAAATAAACCCTTACCGATTGATCATCGTCATCCGACTCATAGTTCTCGGTGGTTCCCTATAAAGAGAGAAACTTATTTGGACCGCTTATCTTTAAGATATGAGAAAGAGGGACAATCTTCTCAACTTTGTCCGATTGATATACTTGTTACGACATTTGATCCATTGAAAGAACCCCCTCTAGTAACAGCAAACACAGTTCTTTCCATTCTTGCAGTTGATTATCCTGTCGACAAGGTCTCATGCTATGTCTCCGACGATGGAGCTTCTATCCTTACATTTGAGGCGCTCTTAGAAACATCGGAATTCGCTAAGAAATGGGTTCCATTTTGTAAGAAATATAATATTGAGCCTAGAGCACCTGAATGGTATTTTGCTAACAAGATAAATTACCTTCAAGATAAAGTTCTTCCCTCCTTTGTTAAGGAGAGGAGAGCAATGAAGAGAGAATATGGAGAGTTTAAGGTTCGAATCAATAATTTGGTTTCAAAGGCTAAGAAGGTTCCAGAAGGAGGGTGGACAATGGCTGATGGGACTCTATGGCCAGGAAATAACGATTGCAATCATCCTGGGATGATTCAGGTTTTTCATGGCCAAAAAGGAGGCAATTTTGACGAAAATGGGAATTATGAATTACCAAGTTTGGTATATGTTTCTAGGGAAAAGCGGCCTGGGTTTAACTACCATGAAAAGGCCGGAGTAATGAATGCGTTGGTCAGGGTATCTGGTGTGGCTACAAATGCACCTTATCTATTGAACTTAGATTGTGATCACTATATCAACAATAGTAAGGTTCTAAGAGAAGCAATGTGCTTCATGATGGATCAATTGTTAGGAGAAAGAGTGTGCTATGTCCAATTCCGACAGACATATGACGGTATTGATCCCGAGACGATTAATATGAAAGGTTTAGATGGTATTCAAGGACCTATATGTGTTAGAACCGGATGTGTCTTCAGAAGAAAAGCTCTCTACGGTTTCAATTCTCCAAGGACAAAGAATCTGCCAACCAGAACATGTGGATGCTGTTGGCTTGGAAGTGGAAAAAAGAAGACAAAGAAGACTAAGAATAAATCTAAATCAGAGACGGAAAAGAGAAACCCTAGTAATGAAGAAGAAACTTCTACTAAGATGCAAAAGCATAAGAAGGAAAAGAAGTTTGGCCAATCTTCTCTATTTGTCGACTCTACTCTTGTAAGTGAAAATGGAATGGCATGGAAAAATGATGGCCCTTCTTTCAATTCGCTTAAAGAAGCCATTCATGTCATTAGTTGTGGCTACGAAGATCAAACGGAATGGGGGAAAGAGGTTGGCTGGATTTATGGTTCAGTCCGAGAAGATATATTGACGGGTTTTAAAATGCACTGCCAAGGCTGGAGATCTATGTACTGTAACCCTGAAAGGCCTGCAATTAAAGGATCTAGCCCTATGAATCTTTCGGATCACCTTGATCGACTACTTTGTGCGGCCCTTGGTTCAGTTGAAATATTTCTAAGTAGGCATTGCCCTCTTTGGTACGGATATGGAGGGGGTTTGATGTGGTTAGCACGTTTGTCTTACATAAATGCCATTGTCTATCCATGGACTTCCATTCCTTTGGTGGCTTATTGTACCCTACCTGCAGTTTGCCTGCTTACAGGGAAATTTATAACGCCAGAGCTCAGCAATGAGGCTAGCATGTGGTTCTTATCTCTTTTTATATGCATCTTTGGTACAACCATATTGGAAATGAGATGGAGTGGAGTTGGTATGCTTGAATGGTGGAGAAACCAGCAGTTTTGGGTGGTCGGAGGGGTTTCGGCAAATCTCTTTGCCCTCTTCCAAGGACTCTTAAATGTGTTAACTGGCCTTGATACAAACTTTATCGTCGGATTCGAAAAAGGAGACAATGAAGAATGGTCAGGACTTCATCCCCTTAGAAGGACCACATTACTCATCCTTCCAATAACACTATTGATAATAAACTTGATAGGAGTCGGGGTTGGAGTTTTGAATGCGATAGGCAACGGGTTTGAATCATGGGGGCCGTTGTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATTGTTCTCTTGTATCCTTCCTTGAAGGGTTTAATGGATAGGAAGAATAGGACTCCTACAGTCATCATAGTTTGGTCAATATTGCTTGCCTCAACCTTAACCCTTTTATGGGTTCATATAGATCCGTTTGTGGCCGAGTCGGATGGTCTGAATTTAGAGGATTGTGGGTTAGATTGTATTTAG 2460 40.49 MRNNIDSTKDGDNDQADSVDLPFVITLLSYHMNNFFYHEIDNSKVCIILVYVDQIGSRGKTAIVKKDTNSIKPNKPLPIDHRHPTHSSRWFPIKRETYLDRLSLRYEKEGQSSQLCPIDILVTTFDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASILTFEALLETSEFAKKWVPFCKKYNIEPRAPEWYFANKINYLQDKVLPSFVKERRAMKREYGEFKVRINNLVSKAKKVPEGGWTMADGTLWPGNNDCNHPGMIQVFHGQKGGNFDENGNYELPSLVYVSREKRPGFNYHEKAGVMNALVRVSGVATNAPYLLNLDCDHYINNSKVLREAMCFMMDQLLGERVCYVQFRQTYDGIDPETINMKGLDGIQGPICVRTGCVFRRKALYGFNSPRTKNLPTRTCGCCWLGSGKKKTKKTKNKSKSETEKRNPSNEEETSTKMQKHKKEKKFGQSSLFVDSTLVSENGMAWKNDGPSFNSLKEAIHVISCGYEDQTEWGKEVGWIYGSVREDILTGFKMHCQGWRSMYCNPERPAIKGSSPMNLSDHLDRLLCAALGSVEIFLSRHCPLWYGYGGGLMWLARLSYINAIVYPWTSIPLVAYCTLPAVCLLTGKFITPELSNEASMWFLSLFICIFGTTILEMRWSGVGMLEWWRNQQFWVVGGVSANLFALFQGLLNVLTGLDTNFIVGFEKGDNEEWSGLHPLRRTTLLILPITLLIINLIGVGVGVLNAIGNGFESWGPLFGKLFFAFWVIVLLYPSLKGLMDRKNRTPTVIIVWSILLASTLTLLWVHIDPFVAESDGLNLEDCGLDCI 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5369830 5374268 + Conep14aG0086400.1 Cone14ag0847 452696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0847 819 MobiDBLite consensus disorder prediction 429 458 - -
Cone14ag0847 819 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 275 407 IPR029044 -
Cone14ag0847 819 MobiDBLite consensus disorder prediction 420 458 - -
Cone14ag0847 819 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 86 787 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cone14ag0847 819 SUPERFAMILY Nucleotide-diphospho-sugar transferases 118 540 IPR029044 -
Cone14ag0847 819 Pfam Cellulose synthase 118 810 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0847 Cone-Chr14:5369830 Cone6ag1303 Cone-Chr6:10472077 0 dispersed
Cone14ag0847 Cone-Chr14:5369830 Cone9ag1255 Cone-Chr9:9240088 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0847 K10999 - vvi:100242715 1088.94