Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0872 ATGAATGCCGGGACGACGACGTTTCAGTTCATACTTGATAAACCCCTAAACCAGCTCACCGAGAATGACATTTCTCAGGTCACACGGGAAGACTGTCGCAAATACCTCAAGGAGAAAGGAATGCGTAGGCCTTCCTGGAACAAATCCCAGGCGATCCAGCAAGTGATTTCTCTCAAAGCTTTGCTTGAACCCTGCGATGATTCCGGCGCCGGTGCTCTCCGGAAGGTCGCTATAACGCCTCGGGTGAGTTTGAATCAAGGTGATTCAACTAAGGAACCGAGTGACGATGCCCAAGATCCTGTTTCTGTGAATGAGTCTGTTACTTGTGGAAAAATGGACCCTCCGAGATCTGTACCTGAGATGGGCGACCCGCCGTTGGACTCAGAAAACAAGGTCACAAGTCCCAGAATTATATTTGGAAAACGTGGATGCAGAAGTGAAGGTGCACCATTTGAGTCAGTTGGGCAAATGACAATTTTCTACTGTGGCAAAGTAAATGTATATGATGGGGTCGCACCTGAAAAGGCACGGGGGATTATGCATCTTGCAGCTAGTCCAATTCATTTTCCGAATGAGGATTCAGTTGGTGGGACTGGAGCTATTTGGCATTCTCCGCCTTATTTGCAAACTGCAAGGGAGAGGGATGGTATTTTTCCTCCTAGTGTCAATATGTTCCAGACGAATCAATCAGGGAAGATGGTCGAGTCCGCTCAACAACATCAAGACAAAAGAAATGTGAATCGCGATTTTGATGCAGAGGGGCAGGCAAACAGGAAAGTCTCCCTGCAAAGATATCTCGTAAAGAGAAAAGATAGAGGAAGATTAAAGAGCAAGAAAAATCCTGGATTAAATTCTAGCTTGGAGGCGTATTATAATTATCATGTGAGGACAACACATATCTCTAATGGGAATCCGAGCGAAATAAGAACACTCTCACATTCTCAACCTGGACTTCCACAAGGCTTTGTTGGATCAACTGATAATCAGGCAAAGATTGCCTACAATCTGCTCAACCTAAACGTTAATGATATTCAAGAATGCTGA 1044 45.11 MNAGTTTFQFILDKPLNQLTENDISQVTREDCRKYLKEKGMRRPSWNKSQAIQQVISLKALLEPCDDSGAGALRKVAITPRVSLNQGDSTKEPSDDAQDPVSVNESVTCGKMDPPRSVPEMGDPPLDSENKVTSPRIIFGKRGCRSEGAPFESVGQMTIFYCGKVNVYDGVAPEKARGIMHLAASPIHFPNEDSVGGTGAIWHSPPYLQTARERDGIFPPSVNMFQTNQSGKMVESAQQHQDKRNVNRDFDAEGQANRKVSLQRYLVKRKDRGRLKSKKNPGLNSSLEAYYNYHVRTTHISNGNPSEIRTLSHSQPGLPQGFVGSTDNQAKIAYNLLNLNVNDIQEC 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5607392 5611498 + Conep14aG0088900.1 Cone14ag0872 452721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0872 347 ProSiteProfiles Tify domain profile. 150 185 IPR010399 -
Cone14ag0872 347 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 281 IPR040390 GO:0005634(PANTHER)|GO:0009611(PANTHER)|GO:0031347(PANTHER)|GO:2000022(PANTHER)
Cone14ag0872 347 Pfam tify domain 155 184 IPR010399 -
Cone14ag0872 347 MobiDBLite consensus disorder prediction 84 105 - -
Cone14ag0872 347 Pfam Jas motif 255 281 IPR018467 -
Cone14ag0872 347 MobiDBLite consensus disorder prediction 84 131 - -
Cone14ag0872 347 SMART tify_2 150 185 IPR010399 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0872 Cone-Chr14:5607392 Cone15ag0833 Cone-Chr15:6085092 2.36E-219 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44777 PF14580 LRR_9 1.60E-81 CL0022 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0872 - - - 0.0