Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone14ag0874 ATGGAGAGGTTTTTCGTGAAATATCGGTTCTGCTTGTTATTGGCGGTTCATCTGTTCCTCCTCTTCCCTTTCGTTTCACCTTTGAATGACGAAGGAAAAGCTTTGATGTCGGTCAAGGCGTCGTTTACCAACTTAGCAAACGTTTTGCTTGACTGGAATGATGCTAACGACTCTGATTTCTGTTCATGGCGTGGAGTTTCTTGTGATAATACAAGCTTCTCTGTTTCATCTCTGAATCTTTCAAGTTTGAATCTGGGTGGGGAGATTTCACCAGCCATTGGAGACTTAAGTAGCTTACGGTCAATAGATTTGCAGGGGAATAAGCTGACTGGTCAAATCCCAAATGAGATAGGAAATTGTGGTTCTCTTGTGCATCTGGATCTATCTGATAATTTACTTTATGGAGATATACCCTTTCCTGTATCTAAGCTAAAGCAGCTTGAGTATTTAAATTTGAAGAACAATCAGCTAACTGGTCCTATCCCTTCGGTACTTACTCAGATTCCTAACCTGAAGACTCTGGATCTTGCGCTTAACCTGCTTACAGGCGAAATACCAAGAATTTTATATTGGAGTGAAGTGTTGCAATATCTAGGGCTACGAGGAAATTCATTGACTGGAACACTAGCACCTGACATGTGTCAATTAACCGGTTTATGGTACTTTGATGTAAGAGGGAACAGCTTGACTGGTACAATCCCGGAGAGCATTGGAAACTGCACAAGTTTTGAAATCTTGGATATATCATACAATCAGATCAGTGGTGAAATTCCCTACAATCTTGGGTTCCTCCAAGTAGCTACTCTATCACTCCAAGGAAATAGGCTTACCGGGAAAATTCCAGAGGTGATCGGGTTAATGCAAGCTCTTGCTGTCCTTGATTTGAGTGAGAATGAGCTAGAAGGGACTATACCACCAATACTTGGCAATTTGTCATATACAGGAAAACTGTACCTGCATGGGAATAAGTTGACTGGGCCGATCCCTCCTGAGCTTGGAAATATGTCAAGACTTAGCTACTTGCAGTTGAATGATAATCAGCTGGTCGGTTCGATTCCATCTGAACTTGGAAAATTAGATCAGTTGTTTGAACTAAATCTAGCAAATAATCGTCTTGATGGACCCATTCCTCGCAACATCAGCTTCTGCACGGCAATGAATAAATTCAATGTCCATGGTAATCACCTTACTGGATCTATCCCGTTAGGCTTCCAGAATTTAGAGAGTTTGACCTATCTAAATCTTTCTGTAAACAATTTCAAAGGACGAATACCAGTTGAGCTGGGCCGTATTGTCAATCTCGATACATTGGATCTTTCTAGCAATAACTTCTCTGGTCCAGTTCCGGCTTCTATTGGTGATTTGGAGCACCTTCTTACCCTAAATTTGAGCATGAACCATCTTGTTGGTCAATTGCCGGCTGCATTTGGAAATCTGAGAAGTGTTCAGATTATGGATATGTCGTTTAACAATATGTCTGGTAACATTCCCTTGGAGCTGGGTCAACTACAAAATATTGTATCTCTAATTCTGAAGAACAACAACTTTCAAGGGAAAATACCTGACCAGCTGGAGAATTGTTTTAGTCTTGTCAACTTGAATGTCTCGTACAACAACCTCTCAGGTGTTGTGTCTCCTGTGAGAAACTTCTCTAGGTTTTCCCTCGACAGCTTTATTGGTAATCCTTTGTTATGTGCTAACTGGCTCGGATCGATATGTGGGCCCAGTGTTTCAAGTGCTCGAGCAATGTTATCCCGATCGGCGATTGTTTGCATGATCTTGGGCTTTATTACATTATTATCAATGGTGATTGTTGCGGTTTACAAGTCAAACCAACCAAAGCCATCAACAAAGGGTCCAAGGAAAATTATACAAGGTCCGCCGAAGCTCGTAGTTCTTCACATGGACATGGCGATTCACACCCTTGATGACATAATGAGAATAACCGAGAATTTTAATGAGAAGTATATCATAGGATACGGTGCTTCTAGCACGGTTTACAAATGTGTATTAAAAAATTCCCGACCGATTGCAATTAAGCGACTTTACAATCAGCATCCCCATAATTTAAGAGAATTCGAAACCGAGCTTGAAACTGTTGGGAAAATTAGACATAGAAACCTTGTAAGCTTGCATGGGTATTCTCTCTCCCCTTTTGGAAATCTCCTCTTCTATGACTACATGGAAAATGGCTCATTATGGGATCTTCTTCATGGACCATCTAAGAAGGTGAAGCTTGATTGGGAAGCTAGATTGAGGATAGCAGTTGGAGCGGCTGAAGGACTTGCATATCTTCACCATGATTGTAATCCGAGAATTATTCATAGAGATGTGAAGTCCTCAAATATCCTAGTCGATGAGAGCTTTGTGGCTCATCTCTCAGATTTTGGGGTTGCGAAATGCATCCCAAGTTCTAGAACACATGCCTCGACTTATGTTCTTGGAACGATTGGTTATATCGACCCAGAATATGCTCGCACCTCTCGGCTCAATGAGAAATCAGATGTCTATAGCTTTGGTGTTGTTCTTCTTGAGCTCCTCACTGGAAAGAAAGCTGTTGATAATGAGTCTAACTTGCACCAATGGATATTATCCAAGGCAGATAGTGATACAGTAATGGAGGCCGTAGACCAAGAGGTTTCTGTAACTTGCTTGGATTTGGCTCATGTTAAGAAGACATTCCAGCTTGCTCTTCTCTGCACTAAGAAGAAACCATTTGAGAGACCAACGATGCACGAGGTTGCTCGGGTTTTGGTATCTCTCCTTCCGGTTCCTCCTAAGAAATCTTCTCCTGCACCTAACATGAAATCTATAGACTATGCAAGGTGTGTGGTTGATAAGGATCATAATGGACAGAAATTTGATGATGAGGGAACAGACAACAAATCATCTGATGCTCAGTGGTTTCTCCGGTTTGGGGAAGTTATTTCCAAAAATACCCTTTGA 2946 41.45 MERFFVKYRFCLLLAVHLFLLFPFVSPLNDEGKALMSVKASFTNLANVLLDWNDANDSDFCSWRGVSCDNTSFSVSSLNLSSLNLGGEISPAIGDLSSLRSIDLQGNKLTGQIPNEIGNCGSLVHLDLSDNLLYGDIPFPVSKLKQLEYLNLKNNQLTGPIPSVLTQIPNLKTLDLALNLLTGEIPRILYWSEVLQYLGLRGNSLTGTLAPDMCQLTGLWYFDVRGNSLTGTIPESIGNCTSFEILDISYNQISGEIPYNLGFLQVATLSLQGNRLTGKIPEVIGLMQALAVLDLSENELEGTIPPILGNLSYTGKLYLHGNKLTGPIPPELGNMSRLSYLQLNDNQLVGSIPSELGKLDQLFELNLANNRLDGPIPRNISFCTAMNKFNVHGNHLTGSIPLGFQNLESLTYLNLSVNNFKGRIPVELGRIVNLDTLDLSSNNFSGPVPASIGDLEHLLTLNLSMNHLVGQLPAAFGNLRSVQIMDMSFNNMSGNIPLELGQLQNIVSLILKNNNFQGKIPDQLENCFSLVNLNVSYNNLSGVVSPVRNFSRFSLDSFIGNPLLCANWLGSICGPSVSSARAMLSRSAIVCMILGFITLLSMVIVAVYKSNQPKPSTKGPRKIIQGPPKLVVLHMDMAIHTLDDIMRITENFNEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPHNLREFETELETVGKIRHRNLVSLHGYSLSPFGNLLFYDYMENGSLWDLLHGPSKKVKLDWEARLRIAVGAAEGLAYLHHDCNPRIIHRDVKSSNILVDESFVAHLSDFGVAKCIPSSRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGVVLLELLTGKKAVDNESNLHQWILSKADSDTVMEAVDQEVSVTCLDLAHVKKTFQLALLCTKKKPFERPTMHEVARVLVSLLPVPPKKSSPAPNMKSIDYARCVVDKDHNGQKFDDEGTDNKSSDAQWFLRFGEVISKNTL 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5625953 5632438 + Conep14aG0089100.1 Cone14ag0874 452723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone14ag0874 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone14ag0874 981 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 268 918 IPR051716 -
Cone14ag0874 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 623 727 - -
Cone14ag0874 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 28 192 - -
Cone14ag0874 981 SMART LRR_typ_2 287 311 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 168 192 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 144 167 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 335 359 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 96 120 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 407 431 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 216 240 IPR003591 -
Cone14ag0874 981 SMART LRR_typ_2 455 478 IPR003591 -
Cone14ag0874 981 Gene3D Ribonuclease Inhibitor 292 576 IPR032675 -
Cone14ag0874 981 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524(InterPro)
Cone14ag0874 981 Pfam Leucine rich repeat N-terminal domain 28 69 IPR013210 -
Cone14ag0874 981 Pfam Protein kinase domain 653 915 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0874 981 SUPERFAMILY L domain-like 29 311 - -
Cone14ag0874 981 Gene3D Transferase(Phosphotransferase) domain 1 728 929 - -
Cone14ag0874 981 Pfam Leucine Rich Repeat 409 429 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 362 382 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 98 120 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 316 335 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 338 359 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 290 311 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 219 240 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 244 264 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 505 527 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine Rich Repeat 146 166 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 Pfam Leucine rich repeat 433 491 IPR001611 GO:0005515(InterPro)
Cone14ag0874 981 SUPERFAMILY Protein kinase-like (PK-like) 632 918 IPR011009 -
Cone14ag0874 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 303 576 - -
Cone14ag0874 981 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 728 929 - -
Cone14ag0874 981 Gene3D Phosphorylase Kinase; domain 1 625 727 - -
Cone14ag0874 981 SUPERFAMILY L domain-like 310 566 - -
Cone14ag0874 981 SMART serkin_6 652 919 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0874 981 ProSiteProfiles Protein kinase domain profile. 652 922 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone14ag0874 981 Gene3D Ribonuclease Inhibitor 191 283 IPR032675 -
Cone14ag0874 981 Gene3D Ribonuclease Inhibitor 28 190 IPR032675 -
Cone14ag0874 981 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 193 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0874 Cone-Chr14:5625953 Cone4ag1700 Cone-Chr4:12643837 2.72E-173 dispersed
Cone14ag0874 Cone-Chr14:5625953 Cone7ag1617 Cone-Chr7:10987657 1.74E-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82096 PF05047 L51_S25_CI-B8 7.80E-15 CL0172 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone14ag0874 K20718 - mdm:103439673 1540.78